Geotrypetes seraphini (Gaboon caecilian): 117345793
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Entry
117345793 CDS
T09159
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh02010
ABC transporters
gsh04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117345793
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
117345793
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gsh02000
]
117345793
Transporters [BR:
gsh02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
117345793
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
Rep3_N
Motif
Other DBs
NCBI-GeneID:
117345793
NCBI-ProteinID:
XP_033770847
UniProt:
A0A6P8N5T1
LinkDB
All DBs
Position
1:complement(363636820..364452087)
Genome browser
AA seq
2237 aa
AA seq
DB search
MGCLDQLELLLWKNFTLRKRQKVRLIVEILWPLFLFLILVAVRNTNQPIHQEQCHYRNKA
MPSAGILPWIQTILCNMNNLCLNYPTPGEAPGQVNNFESSLLNAGLRDLQNLVSRPTDFI
LYQNIWKEANEWILFLEQLNQTTAERTVPLKDIWKNNETFTAYLKEKLYVPEAIISSIKF
ASIMPKKVMLTSNNASLQHIVCNKSELKEYVKFNSSEELAIFQNISCSLSTEEMKTASDI
FLKNIDPLKFSMIVTDAARIKSTKKMQLIRNTMRDVQTVIKQMPSFFTTAAINNFNLSGT
SISGNSFKEFLRSLNIFLCGFDMKQKESNESASDTTNKNDRFSAPSSNSNDFCHSIITSL
ENTTSLKFLWNTFRPLLMGKVLYTPDNPATQHIIKEANETFRDLEMIKEFGEAWETYGPI
IWQFLQNSSQINLLRDLLNNPIITSIVDIQLNGIGWGIKQFASFLYNGPTEMRPSGMPPY
DWRDVYNYITSAIRSITKFLGCLVLDKFESVPTEWDLVNRSLTLIEEKKFWAGIVFQNMD
DQTSDIPPHVKYKIRMDIDEVESTQKVKDRLWAPGARADASRDLRYVWGGFAYIQDMLDH
GIIRLHSNKSDLLGVFAQQMPYPCYVDDVFVRSLSRSLPLYMTLAWIYSVAMIVKGIVHE
KEARLKEMVKMMGLENGTYWLSWFISSFLPFCISAFLLTLILKLGNVLQYSDGSVVFIFL
VIFCYSTIMQCFFISVFFSKANLAAACGGIIYFVLYLPHVLLLAWQDYLKFPVKVIVSLL
STVAFGYGCDAFSRYEQQGIGIQWGNINVSPVEGERYSFLVSMIMMLFDGCLYFLLTWYI
ENVFPGQYGIPRPWYFPFSRSYWCRVRITNETGTFLSELETKNNALQVFEAEPTHLKQGV
SIKNLVKIYKTGKKLAVDGLSVNFYEGQITSFLGHNGAGKTTTMSILTGLFPPSSGTALV
HGRDIRTEMDSIRQDMGMCPQHNVLFEQLTVEEHIYFYARLKGCDSKQVKEEIDSMIKDT
GLSDKRKDMVKSLSGGMQRKLSIAIAFVGGSKVVILDEPTAGVDPYARRGIWELLLKFKQ
GRTIILSTHHMDEADILGDRIVIISHGKLCCSGSSMFLKKCFGSGYFLTLVKAAAGSSSF
LPEARNELIKKEDEFFHTSNEDEGIGSERGADENLQDANEITTLIQRHVPQAQLIEDIGQ
EITYVLPYKGAHDGSFVHLFEDIDMQLSNLGISSYGISDTSLEEIFLKIAEDTGVDRELT
SSAKDWKRSSRESRRLSVSSVRSNSGLHRADSENDTGSIDDLKGKGSFVITGWTLIYRQF
LALFIKRFHHARRSRKGFIAQVVLPAAFVCLSLIFSMVMPPFVEYPNLELQPWMYGFQRT
FISNDDPANAQVSHVTDSLTDNPGFGTRCMRNDPIPNLPCIMSWMDWYTPPVSESLSDIF
LNGNWSMQNPSPSCRCSTPQRPIMLPDCPVGAGGLPPLERLQNTTDLLENLMERNLTDYL
LKTYQKFYKIRYGGISVGEVNSQVQKNSTEITYLFQELKNLFNISKGNTTDQMLKDIEIL
MKRLGTKHNVKVWFYNQGWHAIVSFINVANNAILRGNLPAWKTVKDYGITAYNHPLNLTK
QQMSDMSLAFSSTDVVVSICVIFAMSFIPASFVLFLIQERVSKAKHLQFVSGVNPVVYWL
SNFAWDMCNYLVPCVIVIILFLCFQQKAYVSSSNLPVLILLLVLYGWSITPLMYPSSFIF
SIPSTAYVVLTSINMFIGINGSVATFVLEMFKDENLNNVNNILKKIFLIFPHFCLGRGLI
DMARNQGIATAFSRFGEDRFENPFNWDLVGKNICAMFIEGIVFFIFTLLLQYKFFIRSWT
IKLNVLPIMKEDKDVSLERARILNGGGQSDLLRICELTKVYKKKKKPAVNRISVGVPQAE
CFGLLGINGAGKTTTFQMLTGDISVTGGDAFINGFSILTQMREVHQNMGYCPQFDALDDL
LNGREHLEFYARLRGVPENDVKKVAEWGIKKLGLIKYATKSAGTYSGGNKRKLSTAIALI
GCPPIVFLDEPTTGMDPKARRFLWDCILSIIKEGRSVVLTSHSMEECEALCTRMAIMVNG
QFKCLGSIQHLKNRFGDGYTVILRVAGSTPQLTSVEEFVENTFPGSVLKEKHHNTLQYRL
PSGHTCLSNIFSAFTDNKEQLNIEDYSVFQTTLDQVFVNFAKYQSEEDTVEHVYENPVEV
ESDVPPLANEMSPTSNV
NT seq
6714 nt
NT seq
+upstream
nt +downstream
nt
atggggtgtttagatcagctggaacttcttctctggaagaacttcactcttaggaagaga
cagaaggttcgcttaatagttgagatattgtggcccttgttccttttccttattttagtc
gctgtaagaaacactaatcaaccaattcatcaagaacaatgtcactatcgtaataaggcc
atgccatcagctggcatacttccatggatacagaccatcttgtgtaacatgaataacctt
tgtcttaattacccaacccctggggaggccccaggtcaagtaaacaactttgaaagttca
ctcctgaatgcaggcctcagagatcttcagaatttggtgtcaaggccaactgatttcatt
ttgtaccagaatatttggaaagaggccaatgagtggattctttttttggagcagctgaat
caaactacagcagaaagaacagttccattgaaggacatttggaaaaacaatgaaacattt
accgcttacctcaaagaaaaattatatgttccagaggcaataatttcaagcataaaattt
gcttctataatgccaaagaaggtcatgctgacttcaaataatgctagcctccaacacatt
gtctgcaataaatcagaattgaaggaatatgtcaaatttaactcatcagaggagctggct
atatttcagaacattagctgttcactttcaactgaggaaatgaaaacagcctctgatatc
ttcttaaagaacattgatcccttaaagttttccatgatagtaactgatgcagctagaatt
aaatcaactaaaaagatgcagctgattagaaacacaatgagagatgtccaaacagttatc
aaacagatgccatctttttttactacagctgctataaacaatttcaatttatcaggcaca
agtatttctggtaattcatttaaagaatttctccgttctttgaacattttcttgtgtgga
tttgacatgaaacaaaaagaaagcaatgagtctgcttcagatactacaaataagaatgat
cggttcagtgcgcccagcagtaacagcaatgacttttgtcactctatcataacatctttg
gagaatacaacatctttaaagtttttatggaatacatttcgtcctcttttgatgggaaag
gtgctctacacccctgacaatccagcaactcagcatattatcaaagaggcaaatgagact
ttcagggaccttgagatgataaaggagtttggtgaggcctgggaaacatatggaccaata
atctggcagtttcttcagaacagttctcaaatcaacttacttagggatttgctgaataac
ccaataataacttcaatagtagacatccaacttaatggcatagggtggggcatcaagcaa
tttgccagttttctgtacaatggccctacagagatgagaccttctggaatgccaccatat
gactggagagatgtctataattacatcacaagtgcaataagaagcataacaaagtttctt
gggtgtcttgtgcttgataaatttgaatctgttcctactgaatgggacctagttaacagg
tcattgacattaattgaagaaaagaagttctgggcagggatagtttttcaaaatatggat
gatcaaaccagtgatatccctccgcatgttaaatacaagattcgaatggacatcgatgaa
gtggaaagtactcaaaaagtcaaggacaggttgtgggcacctggggcaagagctgatgcc
agtagagacctgaggtacgtgtggggtggatttgcctatatccaggatatgttggatcat
ggtatcattcgattacattcaaacaagtcagacctgcttggtgtatttgcacaacaaatg
ccttacccctgctatgttgatgatgtatttgtacgctcactctctcgctcacttcccctc
tatatgactttggcttggatttattctgtggccatgattgtcaaaggtatagtgcatgaa
aaagaggctcggctaaaggaaatggtcaaaatgatgggacttgagaatggaacctattgg
ctgagctggttcatcagcagcttccttcctttctgcattagtgctttcctgctgactctc
atacttaagttggggaatgtgctccagtacagtgatggatctgtggtctttatctttttg
gttatattctgctattccaccatcatgcagtgtttctttattagcgtcttcttctccaaa
gcaaaccttgctgccgcttgtggaggaattatctattttgtgttgtacttgccacatgtc
ctgcttcttgcttggcaagactacctgaaattcccagtcaaagtcattgtgtcccttctc
tcaactgtagcttttggatatggctgtgatgcattttctcgatatgaacaacagggaatc
ggaatccagtggggaaacattaatgttagccccgtagaaggagaacgctacagctttctg
gtttcaatgatcatgatgctgtttgatggatgtctttattttctgctgacatggtatatt
gagaatgtttttccaggtcaatatgggattccacgtccatggtattttcctttttctagg
tcatactggtgtagagttcggattacaaatgagactggtacctttttatctgaattagaa
accaagaacaatgcactacaagtatttgaagcagagccaacccacttaaaacaaggagtt
tccattaaaaacttggtaaagatttacaaaactggtaaaaagcttgcagtggatggactg
agtgttaatttctatgaaggacagatcacatccttccttggtcataatggagcagggaaa
accaccactatgtcaattctcacaggacttttccctccatcatctggcactgcattagtc
catgggagagacattcgaactgaaatggattctatacgacaagacatgggaatgtgcccg
cagcataatgtactgtttgagcagctcaccgtagaagaacacatctatttttatgctcgt
ctaaaagggtgtgattcaaagcaagtaaaagaagagatagattcaatgattaaggacact
ggattatcagacaagcgtaaagacatggtcaagagcctttcaggtggaatgcaaaggaaa
ctgtctatagctatcgcatttgttggtggatcaaaggtggtcattttagatgagccaact
gcaggtgttgatccatatgccagaagaggaatatgggagttgctactaaaattcaaacaa
ggacgcaccatcattctatctacacatcacatggacgaggctgacattttgggagaccgt
attgtcatcatttctcatggtaaactctgctgctcaggctcttctatgtttctgaagaaa
tgttttggaagtggttattttcttaccctcgttaaagcagcagcaggaagcagcagtttc
ttgcctgaggcacgaaacgaactgattaagaaggaagatgagttttttcacaccagcaat
gaggatgagggcattggtagtgaaagaggagctgatgaaaacttgcaagatgcaaatgag
ataacaactttgatccaaagacatgtccctcaagctcaactgatagaggatataggtcaa
gagatcacctatgtattaccatacaagggggcacacgatggctcttttgttcaccttttt
gaagatatagatatgcaactttcaaacctgggcatttccagttatgggatttctgacaca
tctctggaggaaatcttcttgaaaattgctgaagacactggtgtagacagagaactaaca
agttcagcaaaagactggaaaagaagctcccgggaatcgaggcgtttgagtgtttccagt
gttagaagtaactcagggctgcatagggcagattctgaaaatgatactggaagcattgat
gacttgaagggaaaaggttcttttgtaatcactggctggacactgatctacaggcagttc
cttgctcttttcataaaaagattccaccatgcccggagaagccgcaaagggtttattgct
caggtggtgctgccagctgcatttgtttgtttgtcacttatattttcaatggtcatgccc
ccattcgtggagtaccctaacttagaattacaaccttggatgtatggattccagcgaaca
ttcatcagcaatgatgatcctgctaacgctcaagtgtcacatgtgacagattccttgaca
gacaatcctgggtttgggacacgatgcatgagaaatgaccccattccgaaccttccttgt
atcatgagctggatggattggtatactccaccagtgtcagagtcactttcagatatattt
ctgaatggcaactggagcatgcagaatccttctccatcctgtcgatgcagcacaccacaa
aggccaattatgttgccagactgccctgttggagctggaggacttccccctttagagaga
cttcaaaatactacagatttattggagaatttgatggaaaggaatcttacagattatctt
ctaaaaacatatcagaagttctataaaatcaggtatgggggaatttcagtaggcgaagta
aactcacaggttcagaaaaattcaacagaaattacatatttattccaggagctgaaaaat
ctcttcaacatttctaagggtaatacaactgatcaaatgcttaaagacattgaaatactt
atgaagaggcttggcacaaaacacaatgttaaggtgtggttttataatcaaggatggcat
gccattgtgtcatttatcaatgttgctaacaatgctattctacggggaaatctacctgct
tggaagactgttaaagattatggaataacagcgtacaatcatccactcaatctcacaaag
caacaaatgtcagacatgtccttagctttttcttcaacagatgtggtagtatcaatctgt
gttatatttgccatgtcctttatcccagccagttttgtcctctttttgatacaggagaga
gtctccaaggccaaacatttgcaatttgttagtggtgttaatccagtagtttactggtta
tctaactttgcatgggatatgtgcaactatcttgtcccatgtgttatcgttattattctc
ttcctgtgcttccagcaaaaagcctatgtgtcttcatcaaatcttcctgtgcttattctt
ttattagtactttatgggtggtcgatcacccctctgatgtatccatcatcttttatattt
agcattcccagtacagcatatgttgttttgacaagtatcaacatgttcattggcatcaat
ggaagtgtggccacttttgtactggagatgtttaaagatgagaacttgaacaatgtaaat
aatatcctgaagaaaatatttttgatttttccacacttttgtttgggaagaggacttatt
gacatggcaagaaaccaaggcatagcaacagcattttccaggtttggtgaagatcgcttt
gaaaacccctttaactgggacctagtagggaaaaatatctgtgctatgtttatagaaggc
atcgtgttcttcatctttacccttcttctgcaatacaagttcttcatcagatcatggacc
atcaaactcaatgtgctgcctataatgaaagaggacaaggacgtgtctctagagcgtgcc
cgaatcttgaatggaggtggacaatctgatcttctgagaatatgtgaactgaccaaggtt
tataaaaagaagaagaaacctgctgttaacagaatttctgtgggtgttccacaagctgag
tgttttggtctgttgggaataaatggagctggcaaaacaacaaccttccaaatgctgaca
ggagacatttctgttactggtggagatgcattcataaatggattcagcatcttaacccaa
atgagagaggtgcatcagaacatgggttactgccctcagtttgacgcgctagatgatctc
ttaaatggacgtgaacatttagagttctatgcccgcctccgtggcgttcctgagaatgat
gtaaagaaggtagctgagtggggtattaagaaactgggactgatcaaatatgctacaaag
tcagcaggaacatacagtggaggaaacaagagaaaactttcaacagccatagctctgatt
ggatgtccacctatagttttcctggatgaaccaacaactggcatggatccaaaggctcgg
cgcttcctgtgggactgcattcttagcattattaaggaagggagatcagttgttttgaca
tcacacagcatggaagaatgtgaagcgttatgcaccagaatggcaatcatggtgaatggc
cagttcaaatgtcttggaagcatccaacatttgaaaaacagatttggagacgggtacaca
gtgatactgagagttgctggttcaactccacaattgacatcagttgaagaatttgttgaa
aacaccttccctggcagtgttcttaaagaaaaacatcataatactctgcagtatcggcta
ccatctggccacacgtgcttgtcaaatattttcagtgccttcaccgacaacaaagaacag
ctgaatattgaagattattccgttttccagacaactcttgatcaggtgtttgtcaatttt
gctaagtatcagagtgaagaggatactgtggagcatgtctatgaaaatccagttgaagta
gaatcagatgtacctccattggcaaacgagatgtctcctacgagcaacgtttaa
DBGET
integrated database retrieval system
