Geotrypetes seraphini (Gaboon caecilian): 117346876
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Entry
117346876 CDS
T09159
Symbol
TTC37
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117346876 (TTC37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsh03019
]
117346876 (TTC37)
Messenger RNA biogenesis [BR:
gsh03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
117346876 (TTC37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_19
TPR_2
TPR_12
TPR_17
TPR_16
TPR_14
TPR_8
TPR_11
TPR_CcmH_CycH
TPR_9
TPR_15
ANAPC3
TPR-S
ARM_TT21_C
DUF7017
Fis1_TPR_C
RPN6_N
COG4_N
Motif
Other DBs
NCBI-GeneID:
117346876
NCBI-ProteinID:
XP_033773006
UniProt:
A0A6P8PCB5
LinkDB
All DBs
Position
1:4149490..4388337
Genome browser
AA seq
1566 aa
AA seq
DB search
MSSKEVKAALKTARDAIRNKEYKEALKHCKTVLKVEKNNYNAWVFIGVAATELEQPDQAQ
AAYKKATELEPEQILAWQGLGSLYEKTNQKDFKEDLPNVYQKLLELYESVDKQKWCEVCR
KLVDVYHQEKKNLQVARTWHRLIKVRQEDGANDEELHQLWSRMTQLLADDIQSQENETQQ
LLLTAFEHALISAASIPSKEHEKLYRGFIHCLSQFAHEDVKLKKTCEEMMVLYPTACYPL
EVLSLHYIQSSCCSEEAVLCYGKLVEIASESGPGLIGLGVKALNDKQYKEAAQFLSAGLR
HTSTCTLAWCYLAQAQLKMHQYEDVILSSNQALHAVAQLNAFGNPLQQKNLALQLKAEAL
IKLESVSSVEEAINCLEQISDINNDPVLLGLRGQAYLKKGLLDEASKGAQELMHFHPQLA
EPYTLEGLLHYTQKNYQLAEKNFQCAIERNPECADCCYYLGLTYWYMGEETRREKSKAFT
QFLKAAKLDMYLGKAFCYLGHYYRDITKDRLRARGCYKKAFDLDETDATAGAAAVDLSVE
LEDMDTALAVLTTVTSRASAGTAKWAWLRRGLYFIRANQHSQAVADFQAALRADPKDANC
WECLGEAYLSRGGYTTALKCFTKASELNPDSIYGIYKIAAIKQILGNYREAVTEYQQIIK
KSEHYVPALKGLGECYLMMARNALTDYLDGKAVDHIEQAVEFFTRAVQHRPDVSCLWKLL
GDACTCLYNVTPSKVHIHVLGILIGQNIGKQMLKKYELLRLGGRCYGRALKLQSSANLWC
DLGINYYRQAQHLTATNGSMSESNELLEKSLQSLKKSVMLDSRNHLYWNALGVVACSNGI
RNCALAQHAFIKSIQCEQNNVVSWTNLGALYLINESIELSHEAFKVAQSLEPSYVMCWIG
QALIAETVGSYETMDLFRHTTELGMHTEGAKGYAHWVCSTLQDKTNRNTELYRYNILQMN
AIPAAQVVLSKYTERIKDDVSAFTMLGFLNEHLKLKKQATEAYQRAVLLLENTEDREKYK
IALRNYGRLLCAVGQYDEAIQACTSTSLTKFDDITAIALAYFKKGLLPESFKAYEKALST
SDSERDKAHILTALAIVEYKQDRVDAAKTLLFKCSILKEPSIESLQALCTLGLATRDATL
STAALNELLKHDERKDQVYERCLIIAAIFALQGRSVAVQRQASKAIHRNPGDSALWCLLS
RLVPHYTPQYAKGGTVAGNIAHSLHANQAKTSLLYTAVNQLAAGSSSAEDEHSCTLKTIQ
KAAHLFPDDPAVWAGLLAACHTENTVSYLRNNIPKRTGLEMAFVTAVSETSKEKVHLPMS
YTQALENWSLCQAVTGLNDAGRNSEAETLSTKGLKSCSDQSTLLLLLRQVQCKQLLQSGE
QLPEAILEELKKTVASNSTSLVAWIWLAEVYQSQGMMVAAEMCYRKSLQIASQQSNWNGK
LSSLLRLAMLALKICLVKVSSDHWPALVQEATTEALKISFCPLAVLLQGLLQFSVKMGAR
ETRRILERVVYQPGYPETITSVARWYLLRHLHAKYDDEFIDVLVANAKAHGDIRILELHS
KLSAAS
NT seq
4701 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtaaagaagtgaaagcagcattgaagactgcgagagatgccattagaaataaa
gaatacaaagaagcattgaaacactgcaagactgtgctgaaagtagaaaagaataactac
aatgcctgggtttttattggtgttgctgccacagaacttgagcagccagatcaggcccag
gctgcttacaaaaaggcaacagagcttgaaccagagcaaattttggcatggcaggggtta
ggaagtctctatgagaagacaaatcagaaggatttcaaagaagacttaccaaatgtttat
caaaaacttttagaactttatgagagtgttgataagcagaagtggtgtgaagtctgcagg
aaacttgtagatgtgtatcaccaagaaaagaaaaacctgcaagttgccagaacatggcac
agattgataaaggtaagacaggaagatggtgccaatgatgaagagcttcaccagttatgg
tccagaatgacccaactgttggcagatgacatacagagtcaggagaatgagacccagcag
ctgcttctgacagcgtttgagcatgctctcatttctgcagccagcattcctagtaaggag
cacgaaaagctgtacagaggtttcattcactgtttgtcacagtttgcccatgaggatgtt
aagttgaagaagacatgtgaggagatgatggttctctaccctactgcttgttatccttta
gaagtacttagcttacactacattcagtcaagctgctgtagtgaggaggctgtgctctgc
tatggcaagcttgtggagatagcttcagaaagtggtccaggactcattggcctaggtgtt
aaagctctgaatgacaagcaatacaaagaagctgcacagtttctttctgctgggttgcgt
cacactagcacatgtacattggcttggtgttacctggcacaggcccagctgaaaatgcat
cagtatgaagatgtgatcttgtccagtaatcaagcccttcatgcagtagcacagctaaat
gcatttggtaatcctctccaacagaagaaccttgctcttcaattgaaagcggaagcattg
atcaaacttgagagtgttagctctgtagaagaggctattaattgtcttgaacagatttca
gacatcaataatgatcctgtgctgctaggattaagaggccaggcttatcttaagaaaggc
ttacttgatgaagcctctaagggtgcacaagaacttatgcatttccatcctcaactggct
gagccctatacactggaaggacttctgcactatactcaaaagaattatcaactggcggaa
aagaactttcaatgtgctattgaaaggaaccctgaatgtgctgattgttgttactacctg
gggttaacctattggtacatgggggaagagacaagaagagagaaatcaaaagcattcacc
caatttctaaaggccgcaaaactggatatgtacctggggaaagctttctgttacttgggt
cattactacagagatataactaaagacagacttcgagctcgtggctgctataaaaaagct
tttgacttggatgaaacagatgcaacagctggagctgcagccgtggatctaagtgtagaa
ctcgaagatatggatacagctttggcagtcttaactacagtaactagcagagcaagtgct
ggaacagcaaaatgggcctggcttcgacgtggactttattttataagggctaatcaacac
tcacaagctgtggctgactttcaggcagcattaagagctgaccctaaggatgccaactgc
tgggagtgtctaggagaggcatacctgagcagaggtggctatacaactgcattgaaatgc
ttcacaaaagccagtgagctgaacccagactccatatatggaatttataagatcgcagct
atcaagcagatcctaggaaactatagagaggctgtgacggaataccagcaaattataaag
aagtcagagcactatgtgcctgctctaaaagggctaggggaatgttatctcatgatggca
agaaatgctctaacagattacctggatggaaaagctgtggaccacatagaacaagcagtt
gagttctttacaagggctgtgcaacacagacctgatgtatcttgtctctggaagctactg
ggagatgcttgtacctgtttatataatgtcacaccatccaaagtacatatccatgtgctg
ggcattctcattggccaaaatataggcaaacagatgttgaaaaagtatgagctgctcaga
ttgggaggaaggtgttatggccgagcattaaaactgcagtcatcagctaatttgtggtgt
gacctggggataaactactatcgtcaagcacaacatctgacggcaacaaatggcagcatg
agtgaatccaatgagttgttggaaaagtctttgcagtctcttaagaagtctgtaatgttg
gacagtagaaaccatttgtactggaatgcactcggtgttgttgcctgtagcaatggaatc
agaaattgtgcgcttgctcagcatgcttttatcaagtcaattcagtgtgaacaaaataat
gttgtaagttggactaatctaggagcattgtacctgataaatgaaagcattgagctgagt
catgaagcttttaaagtagctcagtcccttgaaccctcttatgtaatgtgctggattggg
caggcccttattgcagaaactgtaggcagttatgaaacaatggatctttttaggcacact
actgaacttggtatgcataccgagggagcaaaaggatatgctcattgggtatgttcaaca
ttacaagacaagactaacagaaacacagaactataccgctataacatattacaaatgaat
gccatccctgcagcccaggttgttctgagtaaatacacagaaagaatcaaggatgatgta
tctgcttttacaatgctgggctttttaaatgaacacctgaaactgaaaaaacaggcaaca
gaggcataccaaagggctgttttactgctggaaaacaccgaagacagagaaaaatacaag
atcgccttgagaaattacggcagattactttgtgctgtaggtcagtatgatgaggccatt
caggcttgcacatcaacttctctcaccaagtttgatgatatcacagcaatcgcactggct
tactttaaaaagggtcttctacctgaaagcttcaaagcttatgagaaggccctctctacc
tctgactctgagcgagacaaagcccacatcttgacagctcttgcaatagtggaatacaaa
caagatagagtggatgctgcaaagactttattgtttaaatgttcaattttaaaggaaccc
agtattgaaagtctgcaggctctttgcactcttgggctggccactcgtgatgctacactc
tcaactgcagcactaaatgagctactgaaacatgatgagagaaaagaccaagtttatgaa
agatgcctgatcattgctgccatttttgcactgcagggcaggagtgtggcagtgcaacgt
caggcttccaaagccatccacagaaatccaggggattctgctttatggtgtctcttgtca
cgactggttcctcactatactccacagtatgcaaagggtggaactgtagcaggcaacatc
gctcatagtcttcatgctaaccaagcaaagacatccctgttgtacactgccgtgaaccag
ttagcagcagggagttcttcagcagaagatgagcacagctgtacactgaagaccatccag
aaggcagcccatctctttccagatgatcctgctgtttgggcaggattgctggcagcctgt
cacactgaaaacacagtttcttacctaaggaataatatccccaagaggacaggtcttgaa
atggcatttgtcactgcagtttcagaaacgagtaaagaaaaggtccatcttccaatgagc
tatacccaggctctagagaactggtctctgtgccaggctgtgactggtttaaatgatgca
ggtagaaactcagaagcagagaccctctccacaaagggcttaaaaagttgctctgatcag
tcaactctgctcttgctcctgagacaagttcagtgtaaacagctcctgcagtcaggtgaa
caacttccggaagccatcttggaagaactgaagaaaacagttgcatctaattccacttca
ttagtagcttggatttggctggcagaggtataccaatcccaaggaatgatggttgctgcc
gaaatgtgttatagaaaaagcctacagatagcatcacagcagagtaactggaatggaaag
ttatccagtctccttcggctagctatgcttgctcttaaaatttgtttggttaaagtttca
agcgatcactggccagcgctagttcaagaggcaacaacagaagctctgaagatttcattt
tgtccgcttgctgttctccttcaaggattgctacagttcagtgtaaaaatgggagcaagg
gaaacccgtcgtattttggaacgggtagtatatcagcctggctatcctgagacaattact
tcagttgcacggtggtatcttctaagacacttacatgcaaaatatgacgatgaatttatt
gatgttcttgtagcaaatgcaaaagctcatggagatatcaggattctagaacttcactca
aaattatcagcagcgtcatag
DBGET
integrated database retrieval system
