Geotrypetes seraphini (Gaboon caecilian): 117351119
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Entry
117351119 CDS
T09159
Symbol
XPC
Name
(RefSeq) DNA repair protein complementing XP-C cells isoform X1
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
117351119 (XPC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gsh03400
]
117351119 (XPC)
DNA repair and recombination proteins [BR:
gsh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
117351119 (XPC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Glyco_hydro_36N
Motif
Other DBs
NCBI-GeneID:
117351119
NCBI-ProteinID:
XP_033781829
UniProt:
A0A6P8PD98
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Position
17:3339931..3353863
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AA seq
933 aa
AA seq
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MAKRKGSVDASTGAGGSKKKAKRELEAKAAEHRRHDDPANVFKKKKAPVKKNLPRAPGEK
DVKGAAKSGALKVAARAVRQKKTEAESQRKKEIVKNEGRQKAEEVSHHALHISGNDSDSG
DSEDESEDDWEEVEELPVLAPDGSGVAARPELVPPINPVEIEIETPEQAKKRERKEKRKA
EFEAYLRRMMNRFNKDVREDTHKVHLLCLLGNGFYRNRVCSLPDLQAVALSIIPANFIKV
PVDRVDGLYLSDLLKWFIATFTLNANLSTEENESLQSTLERRFGIYSMRDEGEMVHMLLI
ILRALQLVCRLVLSLQPLPLKDPPGKGKRSSGAKSSRTGSPGPKGSNKGNKDAVRKNNVR
KQKKSRSEESSEEEADEKPEVQIPSGTKRAAAAPAKNSRRSSKKQKGSTEGLTKAEAKNN
RRRRVASKVSYAEESGSDDSTDSDFQFSESEDSNFSDGDYRKPARTQKRSSGTQKVNTAR
ESVGKAEHPKVQVLPQSSSKKRNKIISSDEEEELRVVAVAKGTDQWLEVFLEHDSKWACI
DCIHGVVGQPQLCYKLATKPVMYIVGIDNKGYTKDITKRYDTMWMTSTRKRRIDPEWWRE
TLEAYRSPFTEREKKEDLELHTKLLDQPLPTSITEFKNHPLYALKRHLLKYEAIYPDTAA
ILGYCRGEAVYARDCVHTLHSRDTWLKDARVVCLGEVPYKMVKGQSNRARKARLADPEKQ
DASDLALFGLWQTEDYQPPVAVDGKVPRNEYGNVYLFKPSMLPIGCCHLQLSNLHRVARK
LDIDCVPAVTGFDFHCGFSHPVTNGYIVCEEHKDALLSAWDNEQANIERKEKEKREKRAL
SNWKLLVKGLLIRERLKQRFGSKQEATGSAAVAGAEFSSDEEGAELETTAGHLTASWPQN
RQAEEQKEAKPLKKSRRQQKGDASHLFPFEKLQ
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcgcaaaggctcagtggacgcttctaccggcgcaggaggaagcaagaaaaag
gccaaaagggagctcgaggctaaggctgcggagcacagaagacacgatgatcctgccaat
gtgtttaagaagaaaaaggctcctgtgaaaaagaatctcccccgagctcctggggagaaa
gatgtgaaaggagctgctaaatctggagctctgaaagtggcggccagagctgtgaggcag
aagaaaacagaagcagagtctcaacgaaagaaagagattgtaaaaaatgaaggcaggcag
aaggcagaggaagtatcacaccatgcacttcacatttctgggaatgattctgactccgga
gactctgaagatgaaagtgaagatgactgggaagaggtggaagaactccctgtgttggca
cctgatgggtcgggagtggctgctcgtcccgagctagtgccaccgattaatccagtggag
atagagattgaaaccccagagcaagcaaagaagagagagagaaaagagaaaaggaaggcc
gagtttgaggcctatctgcgcagaatgatgaatcgtttcaataaagatgtacgagaggac
acacacaaggtgcacctgctgtgtttgctggggaatggcttctatcggaacagggtctgc
agtcttcctgatcttcaagctgttgccctttccatcatccctgctaacttcatcaaagtg
ccagtggatcgtgtggatggtctctatctctcagacctgctgaagtggttcattgctacc
ttcacactgaatgcaaacctgtccacggaggagaatgaatccctgcagtccacgttggaa
agacggtttgggatctattctatgagagacgagggagagatggtccatatgttgttgatt
atccttcgagccttgcagctggtgtgccgcttagtgctttcgttacaaccccttcccctg
aaggaccctccaggaaagggcaaaaggtcttccggagcaaagtcatccaggactggctcg
cctggacccaaaggctcgaacaagggaaataaagatgcagtgaggaaaaataatgtcaga
aaacagaagaagagtcggtcagaggagagcagtgaggaagaggcagatgagaagcccgag
gtgcagattccttctggaaccaagagagctgctgctgctcctgcaaagaacagcagaaga
agctccaaaaagcaaaaggggtccactgagggcttgaccaaagcagaggcaaaaaataat
cgtcgcagaagggtggcctctaaagtctcgtatgcagaagagagcggaagcgatgactcc
acggactctgactttcagttttcagagagtgaggatagtaatttttctgatggggattac
agaaagccagctaggacgcagaagaggtcatcagggacccaaaaggtaaatacagcaagg
gagagtgttggaaaagccgagcaccccaaggtgcaagtattgccacaaagctcttccaag
aagaggaacaagatcatttctagcgatgaggaggaagagctaagagttgtagcagtcgca
aaaggcacagaccaatggttggaggttttcctagagcatgacagtaagtgggcatgtata
gactgcattcacggtgtggtgggtcagccacagttgtgctataaattggccacaaagcca
gtgatgtatattgtgggaattgacaataaaggctacacaaaggacatcacaaagagatac
gataccatgtggatgacctcaacaaggaaacgtcgcattgacccagagtggtggagagag
acattagaagcttatagaagtcccttcactgagagggagaagaaggaagacctggagctt
catactaaactcctggaccagcccttaccaacttccatcaccgagttcaagaatcacccc
ctttatgcattgaagcggcatctactgaagtacgaagccatctatcctgatactgctgcg
atcctgggatactgcaggggagaagctgtctacgccagggactgtgtacacacactgcac
tccagagacacctggttgaaggatgcgcgtgtggtgtgtcttggggaagtgccttacaag
atggtgaagggccaatctaaccgggcacggaaggcgcgcttagctgacccggagaagcaa
gatgccagtgacctggccctgtttggtctctggcagacggaggactaccaacccccggtg
gcggtggatgggaaggtccctcgaaatgagtatgggaacgtgtacctgttcaagcccagt
atgttacccattggatgttgccatctgcagctttccaacctgcacagggttgctcggaaa
ttggacattgattgtgtcccagccgtcaccggatttgacttccattgtggcttctctcac
ccagttaccaatggctacatcgtgtgtgaagaacacaaggatgcgcttttgagtgcctgg
gacaatgagcaagcaaacatagaaaggaaggaaaaagagaaacgagagaagagagctctg
tctaactggaaactgctggtgaaaggacttctcatccgagagcgactgaagcagcgcttt
ggtagtaagcaggaggcgacgggatcggcagcagttgcaggagctgaattttcttcagat
gaagaaggagctgagctggaaactacagctggacatctgactgcatcctggccccagaat
cgtcaggctgaagagcagaaagaagccaagcctctgaaaaagagcaggcggcagcagaaa
ggagatgccagccacttgtttccatttgagaagctgcagtga
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