Geotrypetes seraphini (Gaboon caecilian): 117351625
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Entry
117351625 CDS
T09159
Symbol
SH3TC2
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 2 isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsh04131
]
117351625 (SH3TC2)
Membrane trafficking [BR:
gsh04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
117351625 (SH3TC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
SH3_2
TPR_1
TPR_2
SH3_1
TPR_MalT
SNAP
Bac_thur_toxin
TPR_DENND3
Motif
Other DBs
NCBI-GeneID:
117351625
NCBI-ProteinID:
XP_033783068
UniProt:
A0A6P8Q7B4
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All DBs
Position
18:3700120..3741288
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AA seq
1322 aa
AA seq
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MLFSQDSAGQEAAASSTTSIPPAHLASWTHLQSYATEGKGKCFQEEETMASDSGSSAESL
QSTENYQGTDFVSLAIGEGFPTEILLSFSILSRSSQHPNDELQEVARKRLRAWESDQKEI
LTLFKELSARLLSLEAEKDLFVITFKTVEEIWRFSTYLTLGYVACCLEEVLFNEIYWLNN
ALVEDTEIHIEIAEDHLTTMYLGLLLQEGSFFARVVLCIPHFQREEEKEDLRVSKNELLS
VKNVGHEEKWEGLSLSTGQRGLVPISALEPLPCPFSQWFLRNYPVNCNIPKHSNGPVSLR
MMGRGMCKATEDYKGEKWDELSFCKGDSIGIVGLLIPGLQWFVGKSSVNGAIGFVQTRYV
ALDECLSLEKHLVFVSEKERSSLFIPHQDVKCDSAELLSSLAQTDIGSLYKLDGSKPAEI
LLCLSSETVYEGFKEDQVCDSWKEEDMNDLTRHSGSEQVSVECQSSPGAEEDIFLQQAED
IDDPKFFIDLNASDMEDSEVFDPILTFLNQDHYETHFQPMYDASFSFLNSTFYGFSDEDE
LAFYLETSRNWAKKSQMAWAHIRCCFLLGQLCMKRMKLSQARVYFEEAMNSMNGGFSDPP
LLIALYGNLTAVYMKQKMEARLEHVLEKAVTLLGCMPEYSLNAENELEVLKYMFRKAIVV
GSAPLEARACFLLVRLLLQLGRYEEVLPFTERLQSISTTFVSLTGSAPLDLMPLLSFLYD
KQYLPNLALAAARMAGAESIREMPTPSWRIGLVIRNTSRISGSPFGDSHIPAQACFSLRQ
TLSYSYHCGTVNLQKALCVILSKVHLQYRILDRAIYYSNMAAKLSKNISEEETFESLLSA
GWIYLLNDEPERTVEIMLTLLDSMRETDSVTQCGVLHNLLAIALRRENKIPKAAKNLLWA
LKMAKETGNRRNQAIALANFGVLASSCQANRLAEIYFLKSVWMYFEFCSGNEEELELVQV
LLWLGQILVSRGRLEDGKIWYELALLFSLKSNNVKSQLKVTEELCHFYRNVLVNTRACII
YHEHRLSLVQKLKDREEEEELLETLSELYQALNTAKSLRVALDYTKQSLRIKIDLNKGIK
VAKTWLQAGRLYYFMQEDELVEMYFQAAIETALNLQDLDLALHLYEEAGDIFFNDSQKNE
RAVAFYREGAIPLARRLREHRIELRLCQKLTRLLLSLEDYQQALEFANMAARLSTLLEDR
LQELVAFHRLATVYYFLQMFEMAEYCYLKALALCSSSPQCAQEVKYCLRVYCRLGSLTLL
KLKDGQDAASYFILALAAAMEVGDEKLQRVLRSKLAHIYSIVLQDKEQAACFVQESTDAD
VN
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
atgctgttcagccaggattctgcaggtcaagaggcagctgcttcatcaaccacgtccatt
cctcctgcacacctggccagctggacacacctacagagctacgctactgagggcaaagga
aaatgctttcaggaggaggagaccatggcatcagactcaggatcgtcagctgagtccctt
cagtcaacagagaactatcagggcaccgactttgtatcgctggctataggagaaggattc
cccactgaaattttgctctccttttccattctaagtcgttcttctcagcatcccaatgac
gagctgcaggaggtagccaggaagagactgcgagcttgggagagtgaccagaaggaaatc
ttaaccttgttcaaggaactgtctgccagactcctttccttggaggctgagaaggacctc
tttgtcataacctttaagactgttgaagagatctggagattttctacatatttgactctc
ggctatgtggcctgctgcctggaggaggtactctttaatgagatatattggttgaacaat
gccttggtggaggatacggagatccacatagaaatagccgaagaccatctgacaacaatg
tatctaggtcttctactgcaggaaggctccttttttgccagagttgtgctctgcatccca
cacttccagagggaggaggagaaggaggatctcagagtttccaagaacgagctgctgtcg
gtgaagaacgttggccacgaagagaagtgggaagggctgtccttatccacgggacaacgt
gggctggtgcccatttcagccctggagcctctaccttgccctttctcccaatggttcctg
aggaactacccagtgaattgcaatattcccaagcacagcaatgggccagtctccttgagg
atgatgggcaggggaatgtgcaaagccacagaagactacaaaggagaaaagtgggacgag
ctcagcttctgcaaaggagacagcattggcatcgtcggcctcctcatcccaggacttcag
tggtttgttgggaagtcctcggtcaatggtgccattggttttgtccagacaagatatgtg
gcccttgatgagtgtctgtcactggagaagcacttagtgtttgtaagtgaaaaagagaga
tcgtccctgttcattccacaccaggacgtgaagtgtgacagtgccgaactgttgagcagt
ctggcccagacagatatcggctctctctataaacttgatggatctaagcctgccgaaata
ctcctctgcctgtcctctgagactgtgtatgaaggttttaaagaagaccaggtatgtgat
agctggaaggaggaagacatgaatgatttaaccaggcacagtgggtcagaacaagtgagc
gtggaatgccagagctcccctggagccgaggaggacatctttttgcagcaggcagaggac
atagatgaccccaagttcttcatagatcttaatgctagtgatatggaggactcagaggtg
tttgaccccattttgactttccttaaccaagaccactacgagactcacttccagcctatg
tacgatgcctccttctcctttctcaattctacgttctatgggttctcagatgaagatgaa
ctagctttttatcttgaaacatctcggaactgggccaagaagagccaaatggcctgggct
cacattagatgctgttttctactaggccagctttgtatgaaacggatgaagctgtcccag
gccagagtttactttgaggaagcaatgaattccatgaatgggggattttcggacccaccc
ttgctgatagcactatatggaaacttgactgctgtgtacatgaaacaaaaaatggaagcc
aggctggagcatgtgttggagaaggcagtcaccctactgggctgcatgccagagtacagc
ctcaatgctgagaatgagctagaagtgctgaagtacatgtttaggaaagcaattgtggtc
ggcagtgctcctctggaggcaagggcgtgcttcctcctggtcagactcttgcttcagctt
ggcagatatgaggaggtgttgcctttcaccgaacgtctgcagagcatttccactaccttt
gtctctctgactggttctgctcctctagacttgatgccccttctgagcttcctgtatgac
aagcagtacttaccaaatcttgccttagcagctgccaggatggctggtgctgaaagtata
agagaaatgccaacaccatcatggagaattggcctcgtgattcggaacacctccagaatt
tctggcagcccatttggagacagccatattccagctcaagcttgcttctctcttaggcaa
actttgtcttattcttatcactgtggaactgtaaaccttcaaaaggctttgtgtgtgatt
ttatccaaagtccatctccagtacaggatcctggatagagcaatttactactcaaacatg
gctgccaagctgagtaaaaatatcagtgaagaggagacttttgagtctttgctttctgca
ggatggatctatcttttgaatgacgaaccggaaaggactgtagagatcatgttaaccctt
ctagactccatgcgcgaaacggacagcgttactcagtgtggtgtgcttcacaacctgttg
gccattgccctcagaagggaaaacaaaataccaaaggcagccaagaacttgctctgggca
ttaaaaatggcgaaggaaactgggaacagacgtaaccaagctattgcccttgccaacttt
ggtgtcctagcatcatcctgccaggcaaacaggttggcagagatctattttctgaagtct
gtttggatgtactttgagttctgcagtggtaacgaggaagaactggagctggtacaagtg
ctcctgtggttggggcagatcttggtcagcagagggagattggaagatggcaaaatttgg
tatgagctggccctgctcttttccttgaagtcaaataatgtgaaaagtcagctaaaggtg
accgaggaactctgccatttctacaggaacgtgttggtgaacaccagggcatgcattatt
tatcacgagcatcggctgtccctggtacagaaactgaaggacagagaggaagaggaagaa
ctgctggagactctcagtgagctctaccaagctctaaacacagctaagtccctcagggtg
gccctggattataccaagcaaagtttgagaatcaagatcgatctcaataagggcatcaag
gtggcaaagacctggctgcaagctggcagactctattatttcatgcaggaggatgaactg
gtggaaatgtacttccaggcggccatcgagacggcgctgaacctgcaggacctcgacctt
gccttgcacctgtatgaggaagctggggacatatttttcaatgacagccagaagaacgaa
agagcggtggccttttacagggaaggagcgattcctttagcccggagactcagagagcat
cggatagagcttcggctctgccagaagctcacacggctgctcctttccctggaggattac
cagcaggcactggagtttgcaaacatggctgccaggcttagcacacttttggaggatcgc
ttgcaggagctggtcgcatttcaccgtctggctactgtctactatttcctgcagatgttc
gagatggcagaatattgctatctgaaggccttggctctctgctcttcatctccgcagtgt
gcccaggaggtgaagtactgcttaagggtctactgtcgcctgggcagcctcaccctgctg
aagcttaaggatggccaagatgctgccagctacttcatcttagctctggctgcggccatg
gaagtgggagatgagaagcttcaaagagtccttcgtagcaagcttgctcatatctacagc
atagtcctccaggacaaggaacaagctgcatgttttgtacaggaaagcactgacgctgat
gtgaactaa
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