Geotrypetes seraphini (Gaboon caecilian): 117355189
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Entry
117355189 CDS
T09159
Symbol
ARFGEF1
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 1
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117355189 (ARFGEF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsh04131
]
117355189 (ARFGEF1)
Membrane trafficking [BR:
gsh04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
117355189 (ARFGEF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
BIG2_C
Sec7-like_HUS
DCB
Sec7-like_HDS
Motif
Other DBs
NCBI-GeneID:
117355189
NCBI-ProteinID:
XP_033789242
UniProt:
A0A6P8PL66
LinkDB
All DBs
Position
2:103394276..103777194
Genome browser
AA seq
1844 aa
AA seq
DB search
MYEGKKTKNMFLTRALEKILADKEVKKAYHSQLRKACEVALEEIKAETEKQSLPHEDGKP
GSSTLPPVKSKTSFIEADKYFLPFELACQSRCPRIVSTSLDCLQKLIAYGHLTGSAPDST
TPGKKLIDRIIETICGCFQGPQTDEGVQLQIIKALLTAVTSQHIEIHEGTVLQAVRTCYN
IYLASKNLINQTTAKATLTQMLNVIFARMENQALQEAKQMEKERHRHMHHLQQSPVSHHE
IESPQMRHLPEETIDQLIQEHERNLDHHRNGMDRILQEEEEPENGFDVSSTENEQTEADQ
ATLAENSEICDADSCEYEEKAQDIVESIIQEMVNIVVRDMGELTAVTIGMTEDSNDGENI
HVNGIPGTPISMAYTPSLPDDRLSVSSSDTQESGNTSGPSPGAKFSHILQKDAFLVFRSL
CKLSMKPLSEGPPDPKSHELRSKVLSLQLLLSILQNAGPIFRTNEMFINAIKQYLCVALS
KNGVSSVPEVFELSLSIFLTLLSNFKTHLKMQIEVFFKEIFLYILETSTSSFDHKWMVIQ
TLTRICADAQSVVDIYVNYDCDLNAANIFERLVNDLSKIAQGRGSQELGMTSIQELSLRK
KGLECLVSILKCMVEWSKDQYVNPNFQTTLGQEKPVEQETSETKIPETINRYGSLNSLDS
TASSGIGSYSTQMSGTDNPEQFEVLKQQKEIIEQGIDLFNKKPKRGIQYLQEQGMLGTTQ
EDIAQFLHQEERLDSTQVGEFLGDNDKFNKEVMYAYVDQHDFSGKDFVSALRMFLEGFRL
PGEAQKIDRLMEKFAARYLECNQGQTLFASADTAYVLAYSIIMLTTDLHSPQVKNKMTKE
QYIKMNRGINDSKDLPEEYLSSIYNEIAGKKIAMKETKELTIPTKSTKQSVANEKQRRLL
YNLEMEQMAKTAKALMEAVSHVQAPFTSATHLEHVRPMFKLAWTPFLAAFSVGLQDCDDT
EVASLCLEGIRCAIRIACIFCIQLERDAYVQALARFTLLTVSSGITEMKQKNIDTIKTLI
TVAHTDGNYLGNSWHEILKCISQLELAQLIGTGVKPRYISGTVRGREGSITGTKDQAPDE
FVGLGLVGGNVDWKQIASIQESIGETSSQSVVVAVDRIFTGSTRLDGNAIVDFVRWLCAV
SMDELLSPTHPRMFSLQKIVEISYYNMGRIRLQWSRIWEVIGDHFNKVGCNSNEDVAIFA
VDSLRQLSMKFLEKGELANFRFQKDFLRPFEHIMKRNRSPTIRDMVVRCIAQMVNSQAAN
IRSGWKNIFSVFHLAASDQDESIVELAFQTTGHIVTTVFEKYFPATIDSFQDAVKCLSEF
ACNAAFPDTSMEAIRLIRHCAKYVSDRPQAFKEYTSDDMNVAPEDRVWVRGWFPILFELS
CIINRCKLDVRTRGLTVMFEVMKTYGHTYEKHWWQDLFRIVFRIFDNMKLPEQQTEKAEW
MTTTCNHALYAICDVFTQYFEVLSDVLLDDIFAQLYWCVQQDNEQLARSGTNCLENVVIL
NGEKFTLEIWDKTCSCMLDIFKTTIPHTLLTWRTTGGENDFIFQSDAKEKQLDTMSQKSV
DIHESVQLRTGDYRHHNQLILGSSASEEINKVRSTTKTSEQKLFAALLIKCVVQLELIQT
IDSIVFFPVTSKKEDAENLAAAQRDAVDFDVHIDTQDQGMYRFLTSQQLFKLLDCLLESH
RFAKAFNANNEQRTALWKAGFKGKSKPNLLKQETSSLACGLRILFRMYVDESRTSAWEEV
QRRLLNVCSEALSYFLTLTSETHREAWTNLLLLFLTKVLKISDERFKAHASFYYPLLCEI
TQFDLIPELRAVLRRFFLRIGVVFKISQPPDQALGTAGAIENSD
NT seq
5535 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaggggaaaaaaacgaaaaacatgttcctcacccgcgccctagagaagattctg
gctgacaaggaggtgaagaaggcgtatcactcccagctgcgcaaagcctgcgaagtggcg
ctggaggaaataaaagctgaaactgaaaagcaaagcctccctcatgaagatggcaagcct
gggtctagcactcttccaccagtaaaatcaaagaccagctttattgaagcagacaagtac
ttcttaccatttgagctggcatgtcaatccagatgtcccaggattgttagtacctctctg
gattgcttacagaaacttatagcctatggacatctgacaggcagtgcaccagacagtacc
acgccaggaaaaaaattaattgatagaattatcgaaacaatatgtggttgttttcagggt
ccacaaacagatgaaggggttcaattgcaaataataaaggctttgcttactgcagtaaca
tctcaacatatagaaattcatgaaggcacagtgctgcaggctgtcagaacatgctacaat
atttatctagcaagcaaaaatctaataaatcagacaacagccaaagctactctcacacag
atgctaaatgttatatttgcacgtatggagaatcaggcacttcaggaagcaaagcaaatg
gaaaaggaaagacataggcatatgcaccatttgcagcaatctccagtaagccatcatgag
attgaatcaccccagatgaggcatcttcctgaggagacaattgatcagctaattcaagaa
catgagaggaatcttgatcatcacagaaatggaatggacaggatccttcaagaagaagaa
gaaccagaaaatgggtttgatgtttccagtacagaaaatgaacagacagaagctgatcag
gctacattggcagaaaattcagaaatatgtgatgctgacagctgtgaatatgaagaaaag
gcacaagatattgtagaaagcattatacaggaaatggtgaacatagtagttcgagacatg
ggagaattgacagctgtaaccataggaatgacagaagatagtaatgatggtgaaaacatt
catgtaaatggaatccctggcactccaatatctatggcatatacaccatccttaccggat
gacaggctttctgtctcttccagtgacactcaggaatctggaaatacttcaggaccttct
cctggtgctaagttctctcacattttacaaaaagatgccttcttagtcttcaggtcactt
tgtaaactttctatgaagccactttcagaaggaccaccagatccaaagtctcatgaactc
cggtcaaaggttctttcattgcagcttctactatccattttacagaatgctgggcctatt
ttcaggaccaatgagatgtttattaatgctattaaacagtatttgtgtgttgcactctca
aaaaatggagtttcatctgtcccagaggtttttgagctttccctctccatatttcttacc
ttactctcaaattttaagacacacttaaagatgcagattgaggtgtttttcaaagaaata
tttttatacatattggagacatctactagttcatttgatcataaatggatggtcattcaa
acactgacaaggatttgtgcagatgcccagagtgtagtggatatatatgtaaactatgat
tgtgacttaaatgctgctaatatatttgagagactggtgaatgacctatccaaaattgct
caaggacggggtagccaagaacttggcatgactagtatacaggaattaagtcttcgaaag
aagggtttggaatgcttagtttccatcttgaagtgtatggtggagtggagtaaagatcag
tatgtaaaccctaatttccagactacacttggtcaagaaaaacctgtagaacaagagacc
agtgaaaccaaaatccctgaaactattaacagatatggaagtttaaattcacttgactct
acagcatcatcaggaattggtagctacagcacacagatgtctggtactgacaatccagag
caatttgaggttctaaaacaacagaaggaaatcatagaacaagggatagatctatttaat
aagaaaccaaagagaggaatacagtacttgcaagaacaagggatgcttggcactactcaa
gaagatattgcacaattcttgcatcaagaagaaagattagactcgactcaggttggggaa
ttccttggtgacaatgataaatttaacaaggaagtcatgtacgcatatgtagatcagcat
gatttctctggcaaagactttgtgtcagccctccgcatgtttctagagggctttcgtctt
ccaggagaggctcagaaaattgatcgtctgatggagaaatttgctgctagatatttggaa
tgtaaccaaggacaaaccttgtttgctagtgcagacactgcctatgtcttggcttattct
attatcatgttgacaacagaccttcacagtccacaggtaaagaacaaaatgactaaggag
cagtatattaagatgaaccgaggtattaatgacagtaaagatcttcctgaggagtatctc
tcatctatttacaatgaaatagcaggaaagaaaattgcaatgaaagaaacaaaagagcta
acaattccaacaaaatcaacaaagcagagtgtagctaatgaaaagcaaagaaggctgctt
tataacttagaaatggagcaaatggcaaaaacagcaaaagctcttatggaagcagtgagt
catgtgcaggcaccattcaccagtgcaactcatctagagcatgtgagaccaatgttcaag
ttggcatggacaccattcctagctgcattcagtgtgggtctgcaagactgtgatgatact
gaagtagcttcactttgtttggaaggcatacggtgtgcaatcagaattgcatgtatcttc
tgtatacagcttgaaagagatgcctatgtccaggctctggcaagatttacattactaacc
gtgagttctggtatcactgaaatgaagcagaagaacattgatacaatcaaaactctcatc
acagtagcacatacggatggaaactatttaggaaattcatggcatgagattctgaaatgc
atcagtcagcttgaactggcacaattaataggcactggagtaaagccccgttacatttct
ggaactgttagaggcagggaaggctcgattactggaacaaaagaccaggcacctgatgaa
tttgtgggtctgggattagttggaggaaatgtggactggaagcagattgcaagcattcag
gaatccataggagaaaccagttcacaaagtgtggttgtagctgtagacagaatatttaca
gggtctacaagattggatggcaatgcaattgtggattttgttcgctggctttgtgctgtt
tcaatggatgaactgttgtctcccacacatcctcgtatgttcagcttgcagaagatagta
gaaatatcatactacaatatgggtcgtataagactgcagtggtctagaatttgggaagta
attggagatcattttaataaggttggctgcaattccaatgaagatgtagctatttttgct
gtggactcccttaggcagttgtcgatgaaatttttagaaaaaggagaacttgctaatttc
cgattccaaaaggacttcctcaggccatttgaacatataatgaagagaaacaggtctcct
accattcgagacatggttgtacggtgcatagcacagatggttaactctcaagctgccaat
attcgttcagggtggaaaaatatcttttctgtgtttcacttggctgcatcagaccaggat
gaaagcatagtggagcttgcatttcagacgacagggcacattgtcacaactgtgtttgaa
aaatattttcctgctacaatagattcattccaggatgcagtaaaatgcttatctgagttt
gcatgcaatgcagctttcccagacacaagcatggaagcaattcgcctcattcgtcattgt
gcaaaatatgtgtctgacagaccacaggccttcaaagaatatacaagtgatgatatgaat
gtagcccctgaagaccgagtatgggtgagaggctggttcccaattctgtttgaattatcc
tgcataatcaacagatgcaaattagatgtaagaaccaggggtttaacagtaatgtttgaa
gtaatgaaaacctatggccatacgtatgaaaaacattggtggcaagatttgtttaggatt
gtcttcaggatctttgataatatgaaacttccagagcagcaaactgaaaaagctgaatgg
atgacaactacttgcaatcatgcactttatgcaatctgtgatgttttcacccagtatttt
gaagtacttagtgatgttcttttggatgatatatttgctcagctctattggtgtgttcaa
caagacaatgagcagctagcgcgttctggtaccaactgtttggagaatgttgttattttg
aatggagaaaaatttactttggaaatttgggataaaacatgtagctgtatgttggatatc
ttcaaaaccacaatcccacacacgttgttaacttggcgaaccacaggaggagagaatgat
ttcatttttcagtctgatgcaaaagaaaagcagctggatacaatgtcacagaaatctgtg
gatattcatgaatctgtgcagctgaggactggtgattataggcatcacaaccagctcatc
ctggggtcttctgccagtgaggagatcaacaaagttcgatctacaacaaaaacctcagag
cagaaattgtttgcagcattgttaattaagtgcgttgtccagctggaactcattcagaca
atcgatagcattgtatttttcccagttaccagtaaaaaagaagatgctgagaatcttgct
gctgcgcagagagatgcagtggactttgatgttcatattgacactcaggaccaagggatg
tatcgttttttaacatcacagcagcttttcaaacttttggactgtttgcttgaatcacac
agatttgctaaagcttttaatgctaataatgagcaaagaactgctctctggaaagcaggt
tttaagggaaaatccaagcctaatcttttgaaacaggagactagcagccttgcatgtggg
ttgcgtattctttttcgcatgtatgtggatgaaagccgcaccagcgcatgggaagaagtt
cagcgaagattactaaatgtatgcagtgaagctctgagttatttcctcactcttacatca
gaaactcacagagaagcctggactaatctattattattattcctaacaaaggttttaaag
ataagtgatgaaagattcaaagcccatgcatccttttactaccctctgttgtgtgaaatt
acacagtttgatctgattcctgaactgcgagcagtcctacgaaggttttttctacgcata
ggtgttgtttttaaaatctctcagccaccagaccaagcacttggaacagcgggagcaata
gagaacagtgactga
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integrated database retrieval system
