Geotrypetes seraphini (Gaboon caecilian): 117360618
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Entry
117360618 CDS
T09159
Name
(RefSeq) sodium channel protein type 2 subunit alpha-like
KO
K04834
voltage-gated sodium channel type II alpha
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gsh04040
]
117360618
Ion channels [BR:
gsh04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
117360618
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
FraC
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
117360618
NCBI-ProteinID:
XP_033800545
UniProt:
A0A6P8QXN4
LinkDB
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Position
5:206593610..206943576
Genome browser
AA seq
1995 aa
AA seq
DB search
MAQPSLVPPGPENFRYFTRESLEAIEQRIADEKVKESKQDSRDEDDENGPKPNSDLEAGK
SLPFIYGDIPPGMVSEPLEDLDTYYINQKTFIVLNKGKAIFRFSATSALYILTPFNPLRK
MAIKVLVHSLFSMFIMCTILTNCVFMTMTSPPEWTKNVEYTFTGIYTFESLIKILARGFC
LEKFTFLRDPWNWLDFCVIVMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGHLKNKCVQWPPDESAYELIIVPDFNSTV
DENGAFVNKTVQILNYEEYISKESHFYILEGALDPLLCGNSSDAGKCPEGYVCLKTGRNP
NYGYTSFDTFSWAFLSLFRLMTQDYWENLYQLTLRASGKTYMIFFVLVIFLGSFYLVNLI
LAVVAMAYEEQNQATQEEAERQEAEFQQMLEQLKRMQDEVQIAATAAETMAESREFSGGT
GFDGMSEDSSVTSKLSSKSAKERTNKWKKKTQEEDYNKKFSKSESETSMRRKLTYEKRFS
SPHQSLLSIRGSLFSPRRNSRTSLFSFRGRAKDLESENDFADDEYSTFGDNESRRDSLVP
GRHGGRRNSNISQTSKASRILSVFPVNGKMHSTVDCNGVVSLVGGPSLPASPVGLFLPEG
ITTEIETRKRKSSFYQVSMDFLEDPTQRQRALSIASRLTNTMEELEESREKCPPCWYKFA
NTFLIWDCCESWLKLKHVVRLFVMDPFVDLAITICIVLNTLFMAMEHYPITSAFSNVLLV
GNQVFTGIFTAEMILKLIALDPYYYFQEGWNIFDGIIVSLSLMELGLSNVEGLSVLRSFR
LLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKNYKECVCK
INTDCKLPRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVSGQAMCLIVFMMVMIIGNLV
VLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVGRIQKGLDYIKRVLRECVQKAFFRKK
KVINEITPPEELHNRKASCMYNHNATQIRKDLHFHKDGNGTTSGSGRNVEKCITDEGDYM
SFVDNPSLTVTVPIAIGESDFEHLNTEDCSSESDLEESKEKLNMLSSSEGSTINILPGIL
EGEGEPVEAEPQESLEPEACFTEGCVRKFTCCQVSIEDGRGKLWWTLRKTCFRIVEHNWF
ETFIIFMILLSSGSLAFEDIYIEQRKTIKIILEYADKVFTYIFILEMLLKWIAYGFAKYF
TNAWCWLDFLIVDVSLISLIANALNYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNAL
VGAIPSIINVLLVCLIFWLIFSIMGVNLFAGKFYHCVNTTTGEMFPETVVNNESECFMLI
NQNQSARWKNVKVNFDNVGTGYLSLLQIATFKGWTEIMYAAVDSRNLKDQPKYEENLYMY
IYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQ
KPIPRPSNKFQGLIFDFVSKQAFDIVVMILICLNMITMMVETDDQSDTMENNLYWINLVF
IILFTGEFVLKLISLRYYYFTIGWNIFDFVVVILSIVGLSLAEVIEKYFVSPTLFRVIRL
ARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFAIFGMSNFAYVKKEVG
IDDMFNFETFGNSMICLFQITTSGGWNSLLEPILNSGQPDCDPLKDHPGSFVKGDCGNPA
VGISFFVSYIIVSFLVVVNMYIAVILENFSVATEESAEPLSEDDFETFYEVWEKFDPDAT
QFIEYSKLSDFANALDPPLRVANPNKVQLIAMDLPMVSGDRIHCLDILFAFTKRVLGEGG
EMDSLRQPMEERFMASNPSKVSYEPITTTLRRKEEELSAIAIQRCFRRYRLRKPVKRFSS
LYNKDTFSGENSLPIKEELVIDKLNENLTTEKTDSSPSITSPPSYDSVTKLDKERHEKDK
IEKEEKGKDVRESKK
NT seq
5988 nt
NT seq
+upstream
nt +downstream
nt
atggcacagccaagtcttgtaccaccaggacctgaaaacttccggtattttactagagaa
tctcttgaagctatcgaacaaagaattgcagatgaaaaggttaaggaatccaaacaagac
agcagagatgaagatgatgagaatggtccaaaaccaaacagtgacttggaagcaggaaag
tcattgccatttatttatggcgacattcctccaggaatggtttcagagcctttggaggac
ctggatacatattatatcaatcagaaaacttttatagtattgaataaagggaaggcaatc
ttcagattcagtgccacatctgccttgtacattttaactcctttcaatcctcttagaaaa
atggctattaaagttttggtacattccttattcagtatgtttattatgtgcactattttg
accaattgtgtgttcatgaccatgactagccctccagaatggaccaagaatgtagagtac
acattcactggaatctatacatttgaatctcttataaaaattctggcaaggggcttctgc
ttagaaaagttcactttccttcgagacccatggaactggcttgatttctgtgttattgtt
atggcatatgtgacagaatttgtggacctgggcaatgtctcagcgttgagaacattccga
gttctccgagccttgaaaacaatatcagtcattccaggcttgaagaccattgtgggagcc
ctgattcagtcagtgaagaagctttcggatgttatgattctgactgtgttttgtctgagt
gtatttgcactaatagggctgcagctgttcatgggccacttgaagaataaatgtgtgcag
tggcctccagatgaatctgcttatgaacttattattgttcctgacttcaacagtacagtt
gatgaaaatggtgcatttgtcaataaaaccgttcaaatacttaattatgaggagtacatc
agcaaagaaagtcatttctacatattggaaggggcactggatcctttgctttgtggtaat
agttcagatgcgggtaagtgtcctgaaggatatgtgtgtttgaaaactggtagaaaccct
aattatgggtacacaagctttgacactttcagctgggcatttctatcactgttccggttg
atgactcaagactactgggaaaacctttatcagctgactctgcgagcttctggcaaaacc
tacatgatattcttcgttctggtgattttcctggggtctttctatctagtaaacttgatt
ctggctgttgttgccatggcttatgaagaacagaaccaagcgacacaagaagaagcagag
cggcaagaagcagaatttcaacagatgcttgaacaattaaaaagaatgcaagatgaagta
cagattgcagcaacagcagcggaaaccatggctgaatcaagggaatttagtggtgggact
ggttttgatggaatgtctgaagattcttctgtaacatcaaagctgagttcaaaaagtgct
aaagagagaacaaacaaatggaagaaaaaaacccaggaagaggattataataagaaattc
tctaaatctgaatcagaaaccagtatgcgaaggaaattgacatatgagaaaagattctca
tcgccacatcagtcattgctgagtatccgtggttccttgttttccccaaggcgcaacagc
agaacaagccttttcagttttagagggcgagcaaaggatctagagtcagaaaatgatttt
gcagatgatgaatacagcacatttggagataatgagagcagaagagattctcttgtgccg
ggtagacatgggggacgacgtaacagtaatattagccagaccagtaaagcatctaggatc
ctatcagtgtttccagtgaatggaaagatgcacagcactgtggactgcaatggagtggtt
tccttagtcggtggtccatctctccctgcatcacctgttggactgtttctgccagagggt
atcacaacagaaatagagacgagaaagagaaagtctagtttctatcaggtttcaatggat
tttttggaagatcctactcaaaggcaaagagccctgagtatagctagcaggctaacaaac
acaatggaagagcttgaagaatcgagagaaaagtgcccaccttgctggtataaatttgcc
aacacattcttgatctgggattgttgtgaatcatggttaaaattaaagcatgttgttagg
ctgtttgtaatggacccatttgtggacctcgctattaccatctgcattgtgctgaatact
ttatttatggccatggaacattacccaataacttcagcattctccaacgtgcttttagta
ggaaatcaagtttttactgggatctttacagcagaaatgattttgaagctgattgccctg
gatccatactactatttccaggaaggctggaatatttttgatggtattatcgttagcctt
agtttgatggaacttggtctttcaaatgtggaagggttatcagttctccgatcgttcaga
ctgctacgagttttcaaattggcaaagtcttggccaacattaaatatgttgataaaaatt
attggcaactcagtgggggctttaggaaatctcacattggtgctggccatcattgtcttc
atttttgctgtggttggaatgcagctctttggcaaaaactacaaagagtgtgtctgcaag
atcaatactgattgtaagcttccacgctggcatatgaatgacttcttccactcctttctg
attgtgttccgagtcttatgtggcgaatggatagagacaatgtgggattgcatggaggtt
tctgggcaagccatgtgcctcattgtttttatgatggttatgattattggaaacctggtg
gtcttgaatctttttctggcattgttgctaagctcatttagttcagataatcttgcagct
acagatgatgataatgaaatgaacaatctacagattgctgtgggaaggatacagaaggga
ctagattatattaaaagagttttacgtgaatgtgtccaaaaagcattttttagaaaaaag
aaagttataaatgaaatcacaccacctgaagagcttcacaacaggaaagcgagctgcatg
tataaccacaatgcaactcaaataagaaaagaccttcattttcacaaagatggaaatgga
acaaccagtggcagtggcagaaatgttgaaaaatgcataactgatgaaggtgattatatg
tcattcgttgataatccgagccttactgtaacagtgcctatagcaattggagagtcggat
tttgaacatttaaatacagaagattgtagtagtgaatcagatctggaagaaagcaaagag
aagctaaacatgttgagctcttctgaaggcagcacaattaatatacttcctggaatacta
gaaggcgaaggggaaccagttgaggctgaaccacaagaatcccttgaaccagaagcttgt
tttacagaaggctgtgttaggaagttcacatgttgtcaagtcagcattgaagatgggaga
ggaaaattatggtggacattaagaaaaacctgtttcaggatagttgaacacaactggttt
gagaccttcattatcttcatgattctcctcagcagtggatcactggcatttgaagatatt
tatattgaacagagaaagactattaagatcatcctggaatatgctgataaggtcttcact
tacatttttattttggaaatgcttctaaaatggatagcatatggatttgcaaaatatttc
actaatgcttggtgttggctggatttcctcattgttgatgtctctttgataagcttaatt
gctaatgccttgaactactcagaactaggtgcaattaaatcccttaggacactaagagca
ttaagacctctacgagccctgtcacgatttgaagggatgagggtagttgtgaatgccctt
gtaggagcaattccatccatcataaacgtgcttctggtctgccttatattctggctcatt
ttcagcataatgggagtgaatctgtttgctggcaaattttatcactgtgttaatactacc
actggtgagatgttcccagagactgtagtgaataacgaaagtgaatgctttatgctgata
aatcaaaatcaaagtgcccgatggaagaatgtgaaagtaaactttgataatgtgggaact
ggctatctttctcttcttcaaatagctacatttaaaggatggacagaaattatgtatgca
gcagttgattctcgaaacttaaaagatcaacctaagtatgaagaaaatctgtacatgtat
atttactttgtgatcttcattatctttggatcattctttaccttgaacctcttcattggt
gtcatcattgataacttcaaccaacaaaaaaagaagtttggaggtcaagatatatttatg
acagaagaacaaaagaaatattacaatgcaatgaaaaaattgggatccaagaaaccacaa
aaaccaatacccagaccatcgaataaattccaaggcctaatctttgattttgtctcaaag
caagcatttgatattgttgtcatgattcttatctgccttaacatgataactatgatggta
gaaacagatgaccagagtgataccatggaaaacaatttatactggataaatttagtcttc
attattcttttcacgggagaatttgtgctgaagttgatttcactgcgctattactacttc
acaataggttggaatatttttgattttgtggtggtcatcctatctatagtaggtttgtct
ctggctgaagtgattgaaaaatattttgtatcacctactctgttcagagttatacgactc
gccaggataggccgaatcttacggcttattaaaggtgctaaaggaataagaacattactt
tttgctttgatgatgtcacttcctgctttatttaatattggtcttttgctatttctggtg
atgtttatcttcgccatatttggaatgtccaattttgcttatgtgaaaaaagaagtagga
atcgatgatatgttcaattttgaaacatttggcaacagtatgatttgtctctttcaaatc
accacatctggtggatggaatagtttgctagaaccaattcttaacagtggacagccagac
tgtgatccacttaaggatcaccctggaagctttgttaaaggagattgtggtaatccagct
gttggaatttccttttttgtcagctacattattgtatcttttctagttgtggtaaatatg
tacattgctgttattttggagaactttagtgtggctactgaggaaagtgccgaacccctg
agtgaagatgattttgagacattctatgaagtttgggaaaagtttgatccagatgcaacc
cagttcatagaatatagtaaactttctgactttgcaaatgcgctagatcctcctcttcgt
gtagcaaacccaaataaagttcagcttattgcaatggatctccccatggtaagtggtgat
aggattcactgccttgacatcttatttgcttttacaaaacgtgttttgggggaaggtgga
gaaatggattctcttcgccaaccaatggaagaacgatttatggcatctaatccttccaaa
gtatcctatgagccaattacaaccacgttacgacgcaaagaagaggaactttctgctatt
gctattcagcgctgtttccgtcgttatcgtttacggaaaccagtaaaacggttttcttct
ttgtataacaaggatacatttagtggagagaatagtttacctatcaaggaggagttggtt
attgataagctgaatgaaaacttaactacagaaaagaccgattcaagtccctccataact
tctccaccctcatatgatagtgtaacaaagctagacaaagagagacatgaaaaggacaaa
atagaaaaagaagagaaaggcaaagatgtcagagaaagtaaaaaataa
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