Glycine soja (wild soybean): 114381281
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Entry
114381281 CDS
T06057
Name
(RefSeq) probable pectate lyase 12
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj00040
Pentose and glucuronate interconversions
gsj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
114381281
Enzymes [BR:
gsj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
114381281
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
114381281
NCBI-ProteinID:
XP_028196302
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Position
13:complement(25885185..25890682)
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AA seq
477 aa
AA seq
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MLQTTCIILFSVVAIFLPHGTAMLNLTLPGQHPDPEAVAREVHRKVNASMARREMLGVSE
KEVASCLTGNPIDDCWKCDPDWANNRQRLADCAIGFGQNAKGGKGGQFYIVTDSSDEDPV
NPKPGTLRYAVIQNEPLWIVFPSNMMIKLSQELIFNSYKTIDGRGADVHIVGGGCITLQY
ISNVIIHNIHIHHCHPSGNANVRSSPEHYGYRTESDGDGISIFGSRDIWIDHCTLSRCKD
GLIDAVMGSSAITISNNHFSHHNDVMLLGHSDHYLPDSGMQVTIGFNHFGEGLVQRMPRC
RRGYIHVVNNDFTRWEMYAIGGSAGPTINSQGNRYTAPEDPYAKQVTKRLDAGEGEWSGW
NWRSEGDVLLNGAFFVASGAVAEPNYQNAYSTQPKNVDRISLLTMSAGVLGVARDNNLGM
WIRGPNDGTVYFSDSGPEYTDEMSRSTMPLLPSRILILVSALLCFLGHTTTLTTLPN
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgctccaaacaacctgcattatactcttctctgttgtggccatatttttgcctcatgga
acagcaatgctcaacctcactctcccaggacaacacccagaccctgaagccgttgctcga
gaagttcataggaaagtgaatgcttcaatggcaagaagggaaatgctgggagtgtcagag
aaagaggtggcatcatgtctaacagggaatcccatagatgattgttggaaatgtgaccca
gattgggccaacaacaggcagaggctagcagattgtgcaatagggttcgggcagaacgca
aagggaggaaaaggtggccaattttacatagtcactgattcctcagatgaggaccctgtg
aacccaaaacctggaacacttagatatgcagtgatacagaacgagccactgtggatagtg
ttccccagtaacatgatgattaagctgtctcaagaactcatttttaatagctacaagacc
attgatgggcgtggagctgacgtgcacattgtgggtggaggctgcattactcttcagtat
attagcaatgtcattattcacaacattcacatccaccattgccatccctctggcaacgct
aacgtgcggtcgagcccggaacattatgggtaccgcacggagtcggacggcgacgggatc
tccatcttcggctcgcgtgacatttggatcgaccactgcaccctctcccggtgcaaggac
ggcctgatcgatgcagtgatgggttccagcgctatcacgatctccaacaaccacttctcc
caccacaatgacgtgatgctcctgggccacagcgaccactacctcccagactccggcatg
caggtgaccattggcttcaaccacttcggggagggcctcgtccagcgcatgccgcgttgc
cgacgaggttacatccacgtggtgaacaatgacttcacacgatgggagatgtacgccatc
ggcggcagtgcgggacccaccattaacagccagggaaaccgctacaccgcgccggaggat
ccgtacgcgaagcaggttacgaagaggctggatgccggagaaggggagtggagcgggtgg
aattggcggtccgaaggggatgttttgttgaatggcgcgttcttcgttgcttcgggagca
gttgctgaacctaactatcagaacgcctacagcacccaacctaagaacgtggatcgcatt
tcgcttctcactatgtccgccggtgttctcggcgttgctagggacaataatctgggaatg
tggatcagaggacccaacgatggcactgtatatttttcagattctggcccagaatacaca
gacgaaatgtcccggagtacaatgccgttgctaccttcacgtattttgattcttgtatct
gcactcttatgcttcttaggtcatacaacaaccttaacaacactacccaattag
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