Glycine soja (wild soybean): 114381829
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Entry
114381829 CDS
T06057
Name
(RefSeq) probable pectate lyase 16
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj00040
Pentose and glucuronate interconversions
gsj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
114381829
Enzymes [BR:
gsj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
114381829
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
DUF5123
Motif
Other DBs
NCBI-GeneID:
114381829
NCBI-ProteinID:
XP_028196856
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Position
13:complement(26909690..26911053)
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AA seq
321 aa
AA seq
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MTNNIGKDLIHYKVIDPNDDPINPKPGTLRYGASVIQGKVWITFQRDMHIKLERPLLISS
FTTIDGRGVNVNIADNACLMIFKATNVIIHGIRVHHCKPQAPGIVMGPEGKVIPLGHVDG
DAIRLVTASKIWIDHNTLYNCQDGLLDVTRGSTDVTVSNNWFRNQDKVMLLGHDDGYVRD
QNMKVTIVYNHFGPNCNQRMPRIRHGYAHVANNLYLGWVQYAIGGSMGPSLKSEANLFIA
PTIGSKEVTWRKSTQKNGNTWEFHSVKDAFENGASFTITKGGRVSKPNYSKKQYFKVVDV
KFVRSLTHSSGVLRCSKTSIC
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgacaaacaatattggtaaggaccttatccattataaagttattgaccccaatgatgat
cctataaaccccaaacctggaaccttgaggtatggagcttctgtaattcaaggtaaagtg
tggatcacattccaaagagacatgcacattaaacttgagagacctcttcttattagtagt
tttactaccattgatggtagaggtgttaatgtcaacattgctgataatgcatgcttaatg
atctttaaggcaaccaacgtaatcatccatggcattcgggttcatcattgcaaacctcaa
gccccaggaattgtaatggggcctgaaggcaaggtgattcctttgggccatgtagatggt
gatgcaattcgattagttacagcctcaaagatttggattgatcataacacactttataat
tgtcaagatggtctacttgatgtaacgcgaggttccactgatgtaactgtatccaataac
tggtttagaaaccaagacaaggttatgcttcttgggcatgatgatggatatgtgagagac
cagaacatgaaggttactattgtgtacaaccactttggaccgaattgtaatcaacgcatg
ccaaggattcgccatggatatgcacatgtagccaacaacctttacttaggatgggtgcaa
tatgccattggtggaagcatgggacctagcctcaaaagtgaagctaacctctttatagca
ccaacaatagggagtaaagaggtaacatggagaaagagtactcaaaaaaatggaaacaca
tgggaatttcattcagtgaaagatgcttttgaaaatggagcctccttcacaataacaaaa
ggaggacgtgtgtcaaagccgaattatagcaagaaacaatactttaaagttgttgatgtc
aaatttgtgagatcattaacacactcatcaggtgtattacgatgcagtaaaacttctata
tgctga
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