Glycine soja (wild soybean): 114395336
Help
Entry
114395336 CDS
T06057
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj00040
Pentose and glucuronate interconversions
gsj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
114395336
Enzymes [BR:
gsj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
114395336
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
114395336
NCBI-ProteinID:
XP_028212887
LinkDB
All DBs
Position
18:878198..880562
Genome browser
AA seq
405 aa
AA seq
DB search
MEIPIPIPLSSMLLFLLLVPCCICSSPLQDPELVVEDVQKSINASRRNLAFLSCGTGNPI
DDCWRCDPNWEKNRKRLADCSIGFGKHAVGGRDGKLYVVTDPGDHPVNPKPGTLRYGVIQ
EEPLWIIFKRDMVIKLKQELMMNSFKTIDGRGVSVHIAGGPCITIQYVTNIIIHGINIHD
CKQGGNAYVRDSPTHYGWRTLSDGDGVSIFGGSHVWVDHCSLSNCRDGLIDAIHGSTAIT
ISNNYMTHHNKVMLLGHSDTFTRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYT
HWRMYAIGGSAAPTINSQGNRFLAPNDNTFKEVTKRENSPQSKWKNWNWRSNGDLMLNGA
FFTASGAGASSSYARASSLAAKSSSLVSSITASAGSLRCRKGSRC
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggaaattccaattccaattccactctcatctatgttactctttctacttcttgtacct
tgctgcatttgctcttccccacttcaagatcctgaactagtggtcgaagatgtacaaaag
agcattaatgcctcaaggaggaacttagcatttctttcttgtgggacggggaaccccatt
gatgattgttggagatgtgaccccaattgggaaaagaaccggaagcgtctggcagattgt
tccattgggtttggtaaacatgctgttggaggaagggatggaaaactatatgtggtgact
gaccctggtgatcaccctgtgaaccccaagccaggaacacttagatatggtgtgatccaa
gaggagccattgtggatcatattcaaacgtgacatggtgatcaagctcaagcaagagcta
atgatgaattctttcaagactattgatggtagaggagtaagtgtgcacattgctggtggc
ccttgcattactatacaatatgtgaccaacattatcattcatgggattaacatccatgac
tgcaagcaaggagggaatgcctatgtgagggactctcctacacactatgggtggaggact
ctctcggatggtgatggagtgtcaatctttggtgggagtcatgtttgggtggaccactgc
tctctctccaattgccgtgatggactaattgatgccatccatggatccacggccatcacc
atatccaacaattacatgacccaccataacaaggttatgcttttgggtcacagtgacact
ttcactagggacaagaacatgcaagttaccattgcctttaaccattttggagaagggcta
gtgcagagaatgccaagatgcaggcatggatacttccatgtggtgaacaatgactacacc
cattggagaatgtatgccataggggggagtgctgccccaactatcaatagccaagggaat
agatttcttgctcccaatgacaataccttcaaagaggtgacaaagagggagaattcacca
cagagcaagtggaagaattggaattggaggtcaaatggagatttgatgttaaacggtgcg
ttttttacggcatctggagcaggcgcatcttcaagttatgcaagagcatccagtttggca
gcaaaatcatcttcacttgtgagttctataacagcatcagctggatcacttagatgcaga
aagggttcacgctgctga
DBGET
integrated database retrieval system
