Glycine soja (wild soybean): 114397754
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Entry
114397754 CDS
T06057
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj00040
Pentose and glucuronate interconversions
gsj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
114397754
Enzymes [BR:
gsj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
114397754
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
114397754
NCBI-ProteinID:
XP_028215744
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Position
18:41377068..41383882
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AA seq
451 aa
AA seq
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MKVLSPKLFTLSILLAALVLASANAVSGNEMQKHEATESRDVVEEEKLQVQSLKNSSMAE
RSGSALNEHAVDNPEEIASMVDESIRNYTARRNLNFFSCGSGNPIDDCWRCDKRWYARRK
RLANCGIGFGRNAIGGRDGRYYVVSDPGDDDPVNPKPGTLRHAVIQDRPLWIVFKRDMVI
TLKQELIMNSFKTIDGRGVNVHIAYGACITIQFVTNVIIHGLHIHDCKVTGNAMVRSSPS
HYGWRTLADGDGISIFGSSHIWIDHNSLSNCADGLVDAVMGSTAITISNNYFTHHNEVML
LGHSDSYVRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWVMYAIGGSANPT
INSQGNRYLAPLNPFAKEVTKRVDTGSSVWKSWNWRSEGDLLLNGAFFTSSGAGAAASYA
RASSLGAKSSSLVGTITSGAGVLNCRRGAMC
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgctgtctccaaaattgttcactctcagtattctgctcgcggcgctggtttta
gcttccgccaacgcagtcagcggcaatgagatgcagaaacatgaagccacggaatcaagg
gatgtggttgaagaagagaagttgcaagtgcagagcttgaagaattcgtcaatggcagaa
aggtcagggagtgctttgaatgaacatgcagttgataatccagaggagattgcttccatg
gttgatgagagcatacgcaactacacggctcgaaggaacctgaacttcttctcatgcggg
tccgggaacccaatcgacgactgctggcggtgcgacaagcggtggtacgcccgccgcaag
cgcctagccaactgcggcatcggtttcggccgcaacgccatcggcggccgcgacgggcgc
tactacgtcgtgtcggaccccggcgacgacgacccagtcaacccgaaacccggcaccctc
cggcacgccgtgatccaggaccgccccctctggatcgtgttcaagcgcgacatggtcata
accttaaagcaagaactcatcatgaacagcttcaagaccatcgacggccgcggcgtgaac
gtccacatcgcttatggtgcgtgcatcaccatccagttcgtcaccaacgtgatcatccat
gggttgcatattcatgactgcaaggtgactgggaacgccatggttcggagctctccttcg
cattatggttggaggacccttgctgatggagatgggatctccatctttggctcgagtcat
atttggattgatcataactcgctgtcgaattgcgctgatgggcttgtggatgctgttatg
gggtccactgctattactatttccaacaactacttcacccaccacaacgaggttatgcta
ctgggtcacagtgactcttatgtccgcgacaagcagatgcaagtaaccattgcttacaac
cattttggggagggacttatccaaagaatgcccaggtgcaggcatgggtatttccacgtg
gttaacaacgactatacccactgggtaatgtatgcaattggaggcagtgctaaccccaca
attaatagccagggcaacagatacctcgcccctctgaacccttttgctaaagaggtgaca
aagagagtggacacggggtcatccgtatggaaaagttggaattggagatctgaaggagac
cttttgctcaatggagcctttttcacttcatcaggagcaggagctgcagcaagctatgcc
agagcctcaagtttgggggcaaaatcgtcttctttggttggtaccatcacctctggagct
ggtgttcttaactgccgcaggggtgccatgtgttaa
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