Glycine soja (wild soybean): 114402688
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Entry
114402688 CDS
T06057
Name
(RefSeq) protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5-like
KO
K12199
vacuolar protein sorting-associated protein VTA1
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
114402688
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsj04131
]
114402688
Membrane trafficking [BR:
gsj04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
114402688
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vta1
Vta1_C
MCPVI
Motif
Other DBs
NCBI-GeneID:
114402688
NCBI-ProteinID:
XP_028221144
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All DBs
Position
2:49481549..49484309
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AA seq
467 aa
AA seq
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MANENEPAKLLLPYLQRADELQKHEPLVAYYCRLYAMERGLKIPQSERTKTTNALLVSLM
KQLEKDKKSIQLGPEDNLYLEGFALNVFGKADKQDRAGRADLTTAKTFYAASIFFEILNQ
FGAVQPDLEQKQKYAVWKAAEIRKALKEGRKPTAGPPDGDEDLSVPLSSSSDRYDLGTTE
NTVSSPGPESDSSRSYHNPANYQNLPSIHPAAPKFHDTVNDQHSANIPSSMPFHDRVDNN
KHSSVVSPSSHSFTPGVYPSQDYHSPPPSRDYHSPPPSQDYHSPPSSQDYHPPPPSQDYH
PPPSQDYHPPPARSEGSYSELYNHQQYSPENSQHLGPNYPSHETSSYSYPHFQSYPSFTE
SSLPSVPSNYTHYQGSDVSYSSQSAPLTTNHSSSAQHSSRNETVEPKPTTTQAYQYDSNY
QPAPEKIAEAHKAARFAVGALAFDDVSVAVDFLKKSLELLTNPSAGQ
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgagaacgaacccgcgaagctgctgttgccataccttcaacgcgccgatgaa
ttgcaaaagcatgaaccactcgtcgcttattactgtcgattatatgcaatggaacggggg
ttgaagattccgcaaagtgagcgcacgaagaccactaatgctcttctggtttcgctcatg
aagcagcttgaaaaggataaaaagtcaatccagttggggcctgaagacaatttatatctc
gagggatttgctttgaatgtgtttggaaaagcagacaagcaagatcgtgctggaagagca
gatttgactacagcaaaaacattttatgctgccagtatcttttttgagattcttaatcaa
tttggagcagttcagcctgatctggagcagaaacaaaaatatgctgtgtggaaagcagct
gaaataagaaaagctttgaaagaaggaaggaagcccacagctggcccccctgatggtgat
gaggatctgtcagttcctttgagttcttcaagtgatagatatgaccttgggactactgaa
aatactgtttccagtcctggaccagaatctgattcatcaagaagttatcataaccctgct
aactaccagaatctgccaagcattcatcctgctgctcctaaatttcatgatactgttaac
gaccaacattctgctaatattccatcatctatgccatttcatgatagagtagataataac
aagcattcttccgttgtttctccatcatctcactctttcacacctggagtttatccttcc
caagactaccattctcctccaccttcccgagactatcattctcctccaccatcccaagac
tatcattctcctccatcgtcccaagattatcatcctcctccaccatcccaagattaccat
cctccaccgtcccaagattaccatcctccacctgctagatctgaaggttcttattctgag
ctctacaatcatcagcaatactcaccagagaattcacagcatttaggtcctaactaccct
tctcatgaaacttcctcttattcttatccccattttcagtcttatccaagttttacagaa
agcagccttccatcagtcccatcaaactatactcattatcaaggatcagatgtttcatat
tcttcccagtcggctccgctaactacaaaccattcatcaagtgctcaacacagtagcaga
aatgaaactgtggaacctaagccaacaactactcaggcataccagtacgacagtaactac
cagccagcacctgaaaaaatagcagaggcacacaaggctgcaagatttgccgttggggca
ctggcatttgatgatgtctcagttgcagtagacttcttgaagaaatcacttgagttgctg
acaaatccatcagctggccagtaa
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