Glycine soja (wild soybean): 114410788
Help
Entry
114410788 CDS
T06057
Name
(RefSeq) probable pectate lyase 3
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj00040
Pentose and glucuronate interconversions
gsj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
114410788
Enzymes [BR:
gsj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
114410788
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
114410788
NCBI-ProteinID:
XP_028230519
LinkDB
All DBs
Position
1:4669266..4672323
Genome browser
AA seq
448 aa
AA seq
DB search
MAKIHNFYLLTCLVVMIPTLYANVKEDEAYWKRQSEVLLVDSYWQERASIAEKENQQAYT
SDPYSLTKNLTFSVSEIIIGEKNGRRNLRGRGGKCMATNPIDRCWRCDPNWANNRKKLAD
CVQGFGRNTIGGKNGPFYVVNSSLDNDMVNPAPGTLRHAVTRSGPLWIIFARSMNIRLSQ
ELIMTSDKTIDGRGVDVYIANGAGITIQFIKNVIIHGIKIFNIQVGNGGLIRDSETHYGF
RTYSDGDGISIFGSSNVWIDHVSMRNCKDGLIDAIQGSTAITISNGHFTDHNEVMLFGAS
DSYDGDKIMQITLAFNHFGKRLVQRMPRCRYGFVHVVNNDYTHWEMYAIGGSKHPTIISE
GNRFIAPNNVYAKEITKREYSPEQEWKNWQWRSINDEYMNGAFFREGGSQITDRPFSRQD
MITAKPGSYVGRLTRYAGSLRCIVGKPC
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaattcataatttctaccttttaacctgtttggtagtcatgatacctaccttg
tatgccaatgtcaaagaggatgaagcatattggaagaggcaaagtgaagtacttcttgtt
gattcatattggcaggaaagagcatcaattgctgaaaaagagaaccagcaagcttatact
tctgacccatattcactcaccaagaacttgacctttagtgttagcgaaatcataataggt
gagaagaatggaagaaggaatttgaggggaagaggtggtaaatgcatggcaacaaaccca
attgacaggtgctggaggtgtgatcccaactgggcaaacaatcgcaagaagcttgcagat
tgtgtgcaaggttttggaagaaacactattggtggaaagaatggtccattctatgtggta
aacagtagtttagataatgacatggtgaatcctgctcctggtacccttaggcatgcagtt
acaagaagtggacccttgtggatcatctttgctcgtagcatgaacattaggctcagccag
gagctcattatgacaagtgacaagaccattgatggaagaggagttgatgtctacattgct
aatggggctggtattaccatccagttcatcaagaatgtgatcatccatggaatcaaaatt
tttaacattcaggttggcaatggtggacttattagagattctgagacccactatggtttt
aggacttatagtgatggtgatggcatttccatctttggctccagcaatgtttggattgac
catgtttccatgagaaattgcaaagatggattgatagatgccattcagggttccactgct
attaccatctctaatggccatttcacagaccacaatgaggtgatgttgtttggtgctagt
gacagctatgatggcgataagataatgcagatcacattggcattcaaccactttggcaag
agattagtccaaaggatgccaaggtgcagatatggttttgtccatgtggttaacaacgat
tacactcattgggaaatgtatgccattggtggtagcaagcatcctaccattattagtgag
ggcaacagattcatagcccctaacaacgtatatgctaaagagataacaaagagggagtac
tcaccggagcaagagtggaaaaactggcaatggagatcaatcaatgatgagtacatgaat
ggagcatttttcagagaaggtggttctcagataacagacaggccgttctcaaggcaggac
atgataacagcaaagcctggatcatacgtgggaaggctcactcgttatgctggaagcctt
aggtgcattgttggaaagccttgttga
DBGET
integrated database retrieval system
