Glycine soja (wild soybean): 114412022
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Entry
114412022 CDS
T06057
Name
(RefSeq) probable pectate lyase 18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj00040
Pentose and glucuronate interconversions
gsj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
114412022
Enzymes [BR:
gsj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
114412022
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
114412022
NCBI-ProteinID:
XP_028231586
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Position
5:complement(3869698..3871849)
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AA seq
406 aa
AA seq
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MATTFLSLLFLIFSLLTPTLISSSPVQDPEFVAQEINRKINASVARRNLGYLSCATGNPI
DDCWRCDPNWEKNRQRLADCAIGFGKNAIGGKNGKIYVVTDSGDDDPVTPKPGTLRYAVI
QDEPLWIIFARDMVIKLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNVIIHGINIH
DCKQGGNAMVRDSPRHYGWRTVSDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAI
TISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDY
THWEMYAIGGSANPTINSQGNRFVAPDDRFSKEVTKHEDAAESEWKGWNWRSEGDLLVNG
AFFTASGAGASSSYARASSLSARPSSLVGSITTGAGALTCRKGSRC
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggccaccacttttctttctctcctcttcctcatcttctctctcctcaccccaaccctc
atttcctcttcccctgtccaagaccctgaatttgtggcccaagaaattaacaggaaaatc
aatgcttccgtagctagaaggaatttggggtacttgtcctgtgcgacagggaaccccatt
gacgattgttggaggtgtgacccgaactgggagaagaaccgccagaggctagcggattgt
gcgattggtttcgggaaaaacgccatcggaggaaagaacggaaaaatctacgtggtgacc
gattccggcgacgacgatccggtgacaccgaagccgggaaccctccggtacgcagttatt
caagacgagcctctctggatcatcttcgcaagagacatggtgatcaagctgaaggaggag
ctcatcatgaactccttcaagaccatcgacggaagaggcgccagcgtgcacattgcgggt
ggtccatgcataacgatacagtatgtgaccaacgttataatccatgggataaacattcat
gactgtaagcaaggtgggaatgctatggtgcgggactccccacggcactacggctggagg
accgtgtcggacggtgatggcgtgtcgatctttggagggagccacgtgtgggttgaccat
tgctctttgtctaactgcaatgatgggttgatcgatgccattcatggctctaccgcgatt
accatctccaacaattacatgactcaccatgacaaggtcatgcttttgggccacagtgat
tcctacactcaggacaagaacatgcaggttactattgctttcaaccactttggtgaaggc
cttgttcaaagaatgccaaggtgtaggcatggatattttcatgtggtgaacaatgactat
actcactgggaaatgtatgccattgggggaagtgctaatcctaccatcaatagccaaggc
aacaggtttgttgcacctgatgacagattcagcaaagaggtgacaaagcatgaggatgca
gcagagagtgaatggaaggggtggaattggaggtcagaaggggacttgttagtaaacggt
gcgtttttcacggcatcgggggctggagcctcctctagttatgcaagagcttctagcttg
agtgcaaggccatcttcactggtggggtccataaccactggtgcgggtgcactcacctgt
aggaagggttcccgctgctga
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