Glycine soja (wild soybean): 114412053
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Entry
114412053 CDS
T06057
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114412053
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsj03021
]
114412053
03036 Chromosome and associated proteins [BR:
gsj03036
]
114412053
Transcription machinery [BR:
gsj03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
114412053
Chromosome and associated proteins [BR:
gsj03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
114412053
PBAF complex
114412053
GBAF(ncBAF) complex
114412053
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Mesothelin
Motif
Other DBs
NCBI-GeneID:
114412053
NCBI-ProteinID:
XP_028231622
LinkDB
All DBs
Position
5:complement(4191334..4194697)
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AA seq
513 aa
AA seq
DB search
MNNTNPTKNAATPSFFTNPGTPSIPMNHLLSQTQPQPQGATSHFHGHFQLSQPQTHVLAP
QQQPHPHPHPQVHNNANTNAHVAAPTPPKRASQKPPSRPQGSSNASQSSAFKTMELTVAP
PRKKRSFPYNKVVPEKVAKLVPESAIYAKLLGLETQIDSALARKKIDVQENVRNPRCVRK
TLRVYVYNTFSNQVKVEPGKNGVEEPSWALRITGRVLEDGKDSVAEGISTKEYPKFSAFF
KKITIYLDQGLYQDNHVVVWDSARSAAAQQRDGFEVKRKGDKEFTAVVRMAMNYSPDKFV
VSPQLARVLGVEFDSRARIIAALWHYVKAKKLQSPNDPSFFMCDTSLQKVFGEDKMKFSV
ASQKISQHLSQPRPIHLEHKIKLSGNGPAGSTCYDVQVDVPLPLEKDMSAFLASTERHKD
IDAFDELICDSIKKIHEHHRRRAFFLGFSQSPAEFINALIASQSKDLKLVAGDVSQNTEN
EQCAEFYNQPWVEDAVVRYLTRKNARSDAPGNI
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacaccaacccaaccaagaatgctgcaacgccgtcgtttttcaccaaccctgga
acaccctccatccccatgaaccaccttctctcccaaacgcagcctcaaccacaaggtgcc
acgtcacacttccacggccactttcagctttcacaaccccaaacccacgtgctcgcacca
caacaacagccacaccctcatcctcatcctcaagtgcacaacaatgcaaacaccaacgcc
cacgtggcagcacccacacctcccaagcgtgcaagtcagaaacccccttcacgccctcag
ggctcctccaacgccagccaatcctctgcgttcaagaccatggaacttaccgtggcgccg
ccccggaaaaagagaagctttccctataataaggtggttccggaaaaggtggcaaagctt
gtgccagaatccgcaatctacgccaagttgctgggactcgagactcaaatagactctgct
ttggctaggaagaaaatcgatgtgcaggagaatgttaggaaccctcgctgtgttaggaaa
acgcttagagtttatgtttacaacactttttcgaatcaggtgaaagtggagcctgggaag
aatggtgtggaggagccttcttgggcgcttaggataaccggaagggtgttggaagatggt
aaggattctgtggcggaagggatttcgacgaaggaatatccaaaattctcggcttttttc
aagaagattaccatatacttggatcagggtttgtaccaggataaccatgttgttgtgtgg
gatagtgcccgttctgcggctgcacagcagcgcgatggttttgaagtgaagaggaaagga
gacaaggaattcactgcggtggttaggatggcgatgaattattcgcctgacaagtttgtg
gtttctccgcaactggctagagttttaggggttgagtttgactcgcgagctaggatcata
gctgctctttggcactatgtgaaggctaagaaactgcagagcccgaatgacccttcgttc
ttcatgtgtgacacttctctccagaaggtgtttggggaagacaagatgaaattctctgtg
gcttcgcagaagatatcgcagcatttgtcacagccacggcctatacacctggagcataaa
atcaagctttctggaaatggtccagccggaagtacgtgttatgatgtgcaggttgatgtg
cctcttcccctagagaaggatatgtctgcattcttggcaagcactgagaggcacaaagat
attgatgcttttgatgaactgatctgtgattcaataaagaagattcatgaacatcatagg
agacgggcattttttctcggctttagtcagtccccagcagagtttattaatgccttgatc
gcttctcagagcaaggatctgaagctcgttgctggagatgttagccagaatactgaaaat
gaacaatgtgctgaattctacaatcaaccgtgggttgaggatgctgttgttcgctacctg
acccgaaaaaatgctcgaagtgatgctcctggaaacatctga
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