KEGG   Glycine soja (wild soybean): 114415540
Entry
114415540         CDS       T06057                                 
Name
(RefSeq) splicing factor SF3a60 homolog
  KO
K12827  splicing factor 3A subunit 3
Organism
gsj  Glycine soja (wild soybean)
Pathway
gsj03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gsj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    114415540
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gsj03041]
    114415540
Spliceosome [BR:gsj03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    114415540
 Complex B
    114415540
 Complex C
   U2 SnRNP specific factors
    114415540
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd Desulfoferrod_N
Other DBs
NCBI-GeneID: 114415540
NCBI-ProteinID: XP_028236093
LinkDB
Position
6:10536826..10543656
AA seq 509 aa
MSSTVLEVTRAAHEEVERLERLIVKELQNDPASNKERLYQSHRVRNMIDTITSTTEKLIG
VYEDNDNARKDEIAALGGQTATGINVFSAFYDRLKEIREYHRKHPVARVVDANDDYETLL
NEEPQIEFSGEESLGRYLDLHELYYQYVNSKFGEPIEYSAYLDVFSDTDKIPRKMKMTRQ
YREYLANLLEYLLYFFQRTEPLQDLDRILSKVTTEFEESWVVGKVQRWENDNQENGHVLA
EHAPIDLDYYSTIEELMEVGPERLKEALAALGLKTGGTVQQRAERLFLTKHTPLEKLDRK
HFAKGACGVEKNGVAAVPQEDGNSKEIALMEAKMTKLCHLLEETIARTKDNVVKKQALTY
EEMEAEREEEETQEDSESEDEEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICG
NYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWKKIQQRQGVNKWR
PDLEEEYEDKEGNIYNKKTYTDLQRQGLI
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgtcgtcgacggtgctggaggtgacgcgggcggcacacgaggaagtggagcggttggag
cggctgatagtgaaggagctccagaatgaccctgcctccaacaaagagcgcttgtatcag
agtcaccgtgtgcgaaacatgatcgacaccattacttccaccactgaaaagcttattggg
gtatatgaagataacgacaatgcaaggaaggacgagattgctgcactcggaggccaaacc
gccactggaattaacgtttttagcgccttttatgatagacttaaagagatacgagagtat
cataggaagcacccagttgctcgtgttgttgacgccaatgacgattatgaaacacttctc
aatgaggaacctcaaattgagtttagtggagaggaatcacttggtcgatacctagacttg
catgaattatattatcagtatgtcaattctaagtttggagagccaattgagtattctgca
taccttgatgttttctcagacacagataagattccccgcaaaatgaaaatgaccaggcag
taccgagaatatttggcgaatcttttggagtatctgttatactttttccagcggacagaa
cccctgcaagatcttgatcgaattttgtcaaaggtaacaactgaatttgaagaaagttgg
gttgttggaaaggtacagcgatgggaaaatgacaatcaggaaaatggacatgtacttgct
gagcatgctcccattgatcttgattattatagtacaattgaagaattgatggaagtcggc
cctgaaaggttaaaggaggcactggctgcattggggcttaagactggtggtactgttcag
caacgcgcagagaggctcttcctcacaaagcacacacctcttgaaaagttggacaggaag
cattttgctaagggtgcatgtggtgtagaaaagaatggggttgctgcagttccacaagaa
gatggaaattctaaagaaattgcattgatggaagccaaaatgacaaaactttgtcatttg
ttagaggagacaattgctcgaacaaaagacaatgttgtaaagaagcaagccctaacatat
gaggaaatggaagcagaacgtgaggaggaagagacacaagaggactctgaaagcgaagat
gaggagcagcagatatataatcccctaaaattaccaatgggatgggatgggaagcctata
ccttactggctgtataagctacatggtctgggtcaggaatttaagtgtgagatatgcggg
aactacagttattgggggcgtcgggctttcgaacgacattttaaagaatggcgccatcaa
catgggatgcggtgtcttggtataccaaatactaagaatttcaacgaaatcacatcaatt
gaggaagcaaaggaactttggaagaagatacagcaaagacaaggagtgaacaagtggcgc
ccagatcttgaggaagagtatgaagacaaagaaggcaacatctataataagaagacatac
actgacttacagcgccagggactgatatga

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