Gynuella sunshinyii: YC6258_03195
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Entry
YC6258_03195 CDS
T03690
Name
(GenBank) thioredoxin domain-containing protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
gsn
Gynuella sunshinyii
Pathway
gsn00040
Pentose and glucuronate interconversions
gsn01100
Metabolic pathways
gsn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
gsn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
YC6258_03195
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
YC6258_03195
Enzymes [BR:
gsn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
YC6258_03195
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Motif
Pfam:
Pectate_lyase_2
Beta-AFase-like_GH127_cat
Motif
Other DBs
NCBI-ProteinID:
AJQ95231
UniProt:
A0A0C5VLS4
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Position
complement(3280864..3282498)
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AA seq
544 aa
AA seq
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MQQVLQYLIQYADTLLERYRDPYHGTPLFFDGCDSFTGNPVIWQNTDGTPWEPSNIASQQ
NLFRFLSGLTALTGKSQYRQAAKDAIAWHFKHADKSGLIRWGGHSFLDLKTLQAVGPENK
NMLHELKHHCPFYELMYETDAAATRRLIKAIWNSHVSNWDNLEMSRHGEYGKTFDEHDFW
NKPRHADLEPLREMKGLSFINIGNDLIFSAGMLYKLDQDQEALSWAEFLMRQYVNSRYPD
TKLGCYQYNRPAKTAEAPSDENHPQYTFSFWGDRAQRQFGPEYGDVAKEAWVLFKMDEEA
LNGPEGIYGDCALTQTLLARELGDKGQQLLTWTTEGLEAWIHYAYDPDNNEIKPMFADGK
DLTGHHIPRYGYYGHKGTPFTRRPLPVHVFLACVTNWVETRSEILWPAICAMAKHFELGD
WTPSSPQVKLDTTADETLLLLAVLEMHRATGNQSYLSLAQKLGDNLFKRSANRGLFIASK
DHIHCRFDDIEPLALLSLIAATQDQHDQIPVYRSRGGYIHGDMMMPDGSCKNTMDIKAIY
SRQK
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaagttcttcaatatctcatccaatacgcagatactctgctggagcgctatcgc
gatccatatcacggcacaccgcttttttttgacggttgtgacagcttcaccggcaacccc
gttatctggcaaaacactgacggcaccccctgggagccttcaaatatcgccagccaacag
aacctgttccggtttctgagtggactgactgcccttactggcaagtctcaataccgacag
gccgccaaagatgcaatcgcctggcattttaagcatgctgacaaaagcggtttgatacgt
tggggcggccattcctttctggacctcaaaacactgcaggccgtgggtccggaaaataaa
aatatgctgcatgaacttaagcatcactgccctttttatgagctgatgtatgaaaccgat
gctgctgccacacgacgactgatcaaagcaatctggaacagccatgtcagcaattgggac
aatctggagatgtcccgtcatggtgaatacggtaaaacattcgacgaacacgatttctgg
aataaaccccggcatgctgaccttgaaccattacgggagatgaaaggcctgtcatttatt
aacattggtaatgacctgatctttagcgctggaatgctctacaaactggaccaggatcag
gaggcgctgtcatgggcagagttcctcatgcgccagtatgtcaatagccgttaccctgat
accaaactgggttgctaccagtacaatcgccccgccaagacagctgaggcacccagcgat
gaaaaccaccctcagtacaccttttcattttggggggatcgcgcccagcgacagtttggt
ccggaatacggtgatgttgccaaagaagcctgggtcctgttcaaaatggatgaagaagct
ttaaatggaccggaaggaatttacggagattgtgcactgacccagacattgctcgcccgg
gaactcggtgataaaggccagcaattgcttacgtggaccactgaaggactggaagcgtgg
attcactacgcctatgatccggacaacaatgaaatcaaacccatgtttgccgatggaaaa
gacctgaccggacatcacattcctcgctatggttattatggccacaaaggtactccattt
acccgcaggccacttcctgttcatgtttttctggcctgtgtcaccaattgggtggaaaca
cggagcgaaatactctggccagccatctgtgccatggcaaaacactttgaactcggtgac
tggacgcccagttcaccacaggtcaaactcgataccaccgccgacgaaacactcttatta
ctggccgtactggaaatgcaccgggccacggggaatcaaagctatctgagcctggctcaa
aaacttggggacaacttattcaaacgcagcgccaaccgaggcttgtttattgccagcaaa
gaccacattcactgtcgcttcgatgacatcgaaccactggcattgctcagcctaattgcc
gccacacaggatcaacatgatcagataccggtctaccgaagccgtggcggatacattcat
ggagacatgatgatgccagacggtagttgcaaaaatacaatggatatcaaagccatttat
tcccggcagaaatag
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