Gynuella sunshinyii: YC6258_03381
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Entry
YC6258_03381 CDS
T03690
Name
(GenBank) DNA polymerase III, epsilon subunit and related 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
gsn
Gynuella sunshinyii
Pathway
gsn03030
DNA replication
gsn03430
Mismatch repair
gsn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gsn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
YC6258_03381
03430 Mismatch repair
YC6258_03381
03440 Homologous recombination
YC6258_03381
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gsn03032
]
YC6258_03381
03400 DNA repair and recombination proteins [BR:
gsn03400
]
YC6258_03381
Enzymes [BR:
gsn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
YC6258_03381
DNA replication proteins [BR:
gsn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
YC6258_03381
DNA repair and recombination proteins [BR:
gsn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
YC6258_03381
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
DUF1372
Motif
Other DBs
NCBI-ProteinID:
AJQ95417
UniProt:
A0A0C5VL41
LinkDB
All DBs
Position
3498572..3499279
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AA seq
235 aa
AA seq
DB search
MRQIVLDTETTGISPNEHRIIEIGCVEVINRKLTGNHFHVYINPQREVEQEAIAVHGITN
EFLADKPLFAQVAEEFIEFIRGAQLVIHNAPFDIGFMDMEFSRIPGAPKATRDICTVLDT
LVMAREKHPGQKNSLDALCKRYFIDNSHRELHGALLDAEILADVYLMMTGGQTALSLSNE
DYKDQQNGDHQAVERIAVDGSGLPVIAASAAEAAEHDQFLAMMTRKSEAVIWKKY
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
gtgagacagattgtattagatactgagacaaccggtatcagtcctaatgaacaccgtatt
attgaaatcggttgtgttgaagtgattaatcgtaagctcacgggaaatcactttcatgtc
tatattaatcctcaaagggaagtagagcaggaggcgatcgccgttcacggtattaccaat
gaatttctggccgacaagcccctctttgctcaggtcgctgaagaattcatcgagtttatc
cgcggtgcccagttggttattcataatgcgccatttgatattggctttatggacatggag
ttcagccggataccaggtgccccaaaggccacgcgtgatatctgtacggtacttgatacg
ctggtgatggcgcgcgaaaaacaccctggtcaaaaaaactctctggacgccctctgcaag
cgatatttcatagataacagtcatcgggagttgcacggcgccttgcttgatgctgaaatt
cttgctgatgtttatttgatgatgaccggtggccagacggcactgtctctatcgaatgag
gattacaaagatcagcagaatggcgaccatcaggcagtcgagcggattgcggttgatggc
tcgggactgcctgttatcgcggcttccgctgcagaagctgctgagcatgatcaatttttg
gctatgatgactcgaaaatctgaagcggtgatctggaagaagtattga
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