Gimibacter soli: PH603_07785
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Entry
PH603_07785 CDS
T09793
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
gso
Gimibacter soli
Pathway
gso03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gso00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PH603_07785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gso03021
]
PH603_07785
03400 DNA repair and recombination proteins [BR:
gso03400
]
PH603_07785
Enzymes [BR:
gso01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PH603_07785
Transcription machinery [BR:
gso03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PH603_07785
DNA repair and recombination proteins [BR:
gso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PH603_07785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
IDH
DUF5868
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
WCL55788
UniProt:
A0AAE9XWI4
LinkDB
All DBs
Position
1668689..1669702
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AA seq
337 aa
AA seq
DB search
MQKNWQELIKPNGLSIESGADPLRKAKLVVEPLERGYGMTLGNALRRVLLSSLQGGAVTS
IQIEGVLHEFSSVPGVREDVTDIVLNIKQMPVRVLSDGVKRLHLTASGPGEVRAGQISEV
ADVEILDKDLVICHLDDGATLNMELAVSSGKGYVPADRNRPEDAPIGLIPVDALYSPVKK
VSYKVENTREGQILDYDKLSMEIETDGTITPEDALAFAARILQDQLHVFINFDEPEESVA
TDEDSEPEINRQLLRKVDELELSVRSANCLKNDNIVYIGDLVQKTEAEMLRTPNFGRKSL
NEIKEVLASMGLRLGMELPAWPPENIEELAKKLEQEY
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atccagaaaaactggcaggaactgattaaacccaacggcttgtcgatcgaatcgggtgca
gacccgcttcgcaaggcgaagctcgttgtcgaaccgctcgagcgtggctacggcatgacg
ctcggcaacgcactgcgtcgtgtgctgctgtcgtcgctgcaaggcggtgcggtcaccagc
atccagatcgaaggcgtactccacgagttctcgtcggttccgggtgtgcgtgaagacgtc
acggacattgtgctcaacatcaagcagatgcctgtacgcgtcctttcggacggcgtgaag
cgcctgcaccttaccgcgtcgggcccgggcgaagttcgcgccggccagatcagcgaagtt
gccgatgtcgagatcctcgacaaggacctcgtgatctgtcacctcgacgacggtgcgacc
ctcaacatggaactggcagtttcgagcggcaagggctatgtcccggccgaccgtaaccgt
ccggaagacgcgccgatcggtcttatcccggttgacgcgctctacagccccgtgaagaag
gtcagctacaaagtcgagaacacccgcgagggccagattctcgactatgacaagctttcg
atggaaatcgaaacggacggcacgatcaccccggaagatgcgctggctttcgccgctcgc
atcctgcaggaccagctgcacgtcttcatcaacttcgatgagccggaagaaagcgttgca
acggacgaagattcggaacccgaaatcaatcgtcaactgctgcgcaaggtcgacgaactg
gaactcagcgtccgttcagcaaactgcctgaagaacgacaatatcgtctatatcggcgat
ctcgttcagaagaccgaagccgaaatgctgcgtaccccgaacttcggccgcaagtcgctc
aacgaaatcaaggaagttctcgcctcgatgggcctccgtctcggcatggaactcccggct
tggccgcctgagaatatcgaagagctcgccaagaaactcgaacaagagtactga
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