Gavia stellata (red-throated loon): 104263156
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Entry
104263156 CDS
T08384
Symbol
TNN
Name
(RefSeq) LOW QUALITY PROTEIN: tenascin-N
KO
K06252
tenascin
Organism
gste
Gavia stellata (red-throated loon)
Pathway
gste04510
Focal adhesion
gste04512
ECM-receptor interaction
gste04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104263156 (TNN)
04518 Integrin signaling
104263156 (TNN)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104263156 (TNN)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
gste00536
]
104263156 (TNN)
Glycosaminoglycan binding proteins [BR:
gste00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104263156 (TNN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
Fn3_Dep-1_3rd
EGF_TEN
FN3_DSCAM-DSCAML_C
EGF_Teneurin
DUF4998
Pur_ac_phosph_N
EGF_2
Fn3_Dep-1_4th
Fn3_VIN3
DUF7949
EGF_Tenascin
Ig_ILCR1
TSC22
Motif
Other DBs
NCBI-GeneID:
104263156
NCBI-ProteinID:
XP_009818057
LinkDB
All DBs
Position
Unknown
AA seq
1125 aa
AA seq
DB search
MPVQSWLIFPVGVLLCCALQTSAIQQPASRNCTSDGQKISFSHSYKIDLPTSSQIKVEAD
PLQHEEDSEVQLDPGEAEENEEQNVIFRHNIHVHAPKGDCETLTHIKGLLERMEKLEKEV
AKLREVCSPQKCCGGSQGVSHCSGHGTFLYETCSCKCAEGWEGSDCSRPTCPSHCSGHGR
CDSGKCICDEPYFGEDCSQQLCPENCSGNGICDTAKGVCRCYEEFIGEDCSEKRCPGDCS
GNGFCDTGECYCHNGFFGLDCSQVLAPQNLQLLNSTERSLAVSWDQMIDVDNYLISYXSV
GYETLVKQFHVPKEQLSYEIVGLHPDTTYNVTLRHVKKGIASEPKYLEARTVLSALGAIW
VTEEMDHSLEVEWENPPTDVDYYKLKFRSLVDMDEKQVMVPKSNDPKSRHIMTGLKPGTE
YEVTIIPVKDNKEGKPSSVSGRTGVDSPTNVATDRVTEDSATVSWNKVEAPIDRYMVRYT
SADGDIKEIEVGSENDTMTLLDLKPGMEYVIHIWAEKGPQRSKKASTSTVTEIDSPTELL
TEQVTEDAITVSWIKVQASIDRYRVSYTSANGDTEEREVEKDKNVTTLVGLKPSMDYIIY
IWAEKGEQQSKRASTEAVTEMDSPAHLVTDQVTENTATISWDRVQALIDRYMVNYTSVDG
DTEEMEVGKNETTVTLTGLKPGIEYVIYLWAEKGARQSKRTSTEAVTEMDSPKNLVTDQV
TEDSATISWDTVQAPIDRYMVSYTSADGDTKEIEVGKGRSITTLTGLKPGMKYTIHLWAE
LGSKQSKRVSTDTLTEIDPPKNLHVSDVTHSAGVVTWTPPAAQIDGYVLTYQGRDGMSKE
VQLSPSEQRFVLEGLEQGMRYTIFVMAYKGDHQSRQTDSTFSTVSFLYPYPTDCSQTQQN
GNASSGIYTIYLNGDGSRPMQVYCDMTTDGGGWIVFQRRSTGEVDFYKRWKNYVEGFGDP
TGEFWLGLDKLHNLTSSSPIRYELRVDLRTASESVYAVYDFFQVASSRDRYRLSVGNYRG
NAGDAMTYHNGWKFTTWDRDNDVALSNCALTHHGAWWYKNCHLANLNGKYGESKHSEGVN
WEPWKGHEFSIPFTEMKIRPQSFSNEPILGRKKRSLSGKRKKIRA
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtccagagctggcttatcttcccagtgggagtattgctgtgctgtgctcttcag
acatccgccattcaacaacctgcgtctcgcaactgcaccagcgatggtcaaaaaatatcc
ttcagccactcctacaagattgacctgcccacatcctcccagattaaggtggaggcagat
ccattacaacatgaagaggacagtgaggtgcagctagatcctggagaggccgaggaaaat
gaagagcagaatgtcatctttaggcacaacatccatgtgcacgcacccaaaggggactgt
gaaactttgacccacattaagggtctgcttgagaggatggagaagctggagaaagaagtg
gcaaagctgagagaagtttgcagccctcagaagtgctgtgggggaagccaaggtgtctcg
cattgcagcggccatgggactttcctctatgagacttgcagctgtaagtgtgctgagggc
tgggagggcagcgactgctcccgccccacctgccccagccactgcagcggccatgggcgc
tgcgacagcgggaagtgtatctgtgatgagccttactttggtgaggactgcagccagcag
ctctgtcctgagaactgcagtggcaacggcatctgtgacacagccaaaggggtctgccgg
tgctacgaggagttcattggagaggactgcagcgagaagcgatgtcctggggactgcagt
ggcaatgggttctgtgacacaggagagtgttactgccacaatggcttctttggcctcgac
tgctcccaggtgcttgctcctcagaacctgcagctgctgaactccacagagagatctctg
gctgtcagctgggatcaaatgattgatgtggataattacctcattagctattagtcagta
gggtatgagacattggtgaagcaattccatgtgcccaaagagcagctcagctatgagatt
gtgggtctccaccctgacaccacatataatgtcacgcttcgccatgtgaagaaggggatt
gccagtgagcccaagtatctagaagcaagaacagttctgtctgcactcggagccatctgg
gtgacagaggagatggatcactccctggaagtggagtgggagaacccaccaacagatgtg
gattattacaagctgaagttcagatctctggtggacatggatgagaagcaggtcatggtg
cccaaaagcaatgaccctaagagcaggcacatcatgactggcctgaaacctggcacagag
tacgaggtcaccatcatacctgtgaaagacaataaagaggggaaaccatcctcagtgagt
ggtaggactggagttgatagcccaaccaacgtggcaactgaccgagtaacagaggattca
gccactgtctcatggaataaagttgaggctcctatagacaggtacatggtgagatacacc
tcagctgatggggacatcaaggaaatagaggtggggagtgaaaatgacaccatgaccttg
ctggatctgaagccaggcatggaatatgtcatccacatctgggcagagaagggaccccag
aggagcaagaaggcaagcaccagcaccgtgacagaaatcgacagcccaactgagctgttg
actgagcaagtgacagaggatgcaattactgtttcgtggatcaaagtgcaggcttcaata
gacagatacagagtgagctacacctcagctaatggggacacagaggagagggaggtggag
aaagacaagaatgtcactactttggtaggactgaagccaagcatggactacatcatttac
atctgggcagaaaagggagaacaacagagcaagagagccagcactgaggctgtgacagaa
atggacagcccagctcacctggtgactgaccaagtgacagagaacacagccaccatctcc
tgggacagggtccaggctctcatagataggtacatggtgaactacacctctgttgatggt
gacacagaggagatggaagtggggaagaacgagactaccgtgactctgacaggactgaaa
cctggcattgaatatgtcatctacctctgggcagagaagggagcccggcagagcaaaagg
accagcactgaggcagtgacagaaatggacagcccaaagaatctggtaactgaccaagtg
acagaggactcagccaccatctcctgggatactgtccaagctcccatagacaggtatatg
gtgagctacacttctgctgatggggacaccaaggaaatagaagtggggaagggcaggagc
attaccaccctgacaggactgaaaccaggcatgaagtacaccatccatctctgggcagag
ctgggaagcaagcagagcaagagagtgagcactgacacgctgacagagatcgatcctccc
aagaacctccatgtatcagacgtgactcattctgctggtgtggttacctggactcctcct
gcagcacagattgatggctacgttctgacctaccagggtcgagatggcatgagcaaggaa
gtacagctgagtcctagtgaacaacggtttgtgctggaaggactggaacaaggaatgagg
tataccatctttgtgatggcctataagggagatcatcagagcagacagacagacagtacc
ttctcaacagttagcttcctctacccctatcccacggactgcagccagacgcagcagaat
ggaaatgcctctagtggcatttacaccatttacctgaacggggatggcagcaggccgatg
caggtgtactgtgacatgaccactgatggaggcgggtggatagtgtttcagaggcggagc
actggtgaggtggatttctacaaacgctggaaaaattatgtggaaggctttggagatccc
actggggaattttggcttggtcttgacaagctgcacaatctcacaagcagcagccccatc
cgctatgagctccgagtggatttgcggacggccagcgaatctgtctatgctgtctatgac
ttcttccaggttgcctcaagcagggacagatacaggctgtcggtggggaattacagaggc
aatgctggggatgcaatgacctaccacaatggctggaagttcacaacgtgggacagagac
aatgatgtggctctcagcaactgtgctctgacacaccatggtgcgtggtggtacaagaac
tgccacttggccaacctcaatgggaaatacggggagagcaagcacagcgagggggtgaac
tgggagccatggaaaggccatgaattctccatcccttttactgagatgaagatccgtcct
cagtctttcagtaatgagccaatcctggggaggaagaagaggtctctatcagggaagagg
aagaagatcagggcttaa
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integrated database retrieval system
