Gloeophyllum trabeum: GLOTRDRAFT_71322
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Entry
GLOTRDRAFT_71322 CDS
T03130
Name
(RefSeq) hypothetical protein
KO
K12882
nuclear cap-binding protein subunit 1
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr03013
Nucleocytoplasmic transport
gtr03015
mRNA surveillance pathway
gtr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GLOTRDRAFT_71322
09122 Translation
03013 Nucleocytoplasmic transport
GLOTRDRAFT_71322
03015 mRNA surveillance pathway
GLOTRDRAFT_71322
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gtr03019
]
GLOTRDRAFT_71322
03041 Spliceosome [BR:
gtr03041
]
GLOTRDRAFT_71322
Messenger RNA biogenesis [BR:
gtr03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
GLOTRDRAFT_71322
Spliceosome [BR:
gtr03041
]
Common components
Common spliceosomal components
Cap binding complex
GLOTRDRAFT_71322
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
Motif
Other DBs
NCBI-GeneID:
19308171
NCBI-ProteinID:
XP_007862597
JGI:
Glotr1_1_71322
UniProt:
S7QKB1
LinkDB
All DBs
Position
Unknown
AA seq
877 aa
AA seq
DB search
MSYERPYYNKRRNRDDFDNPRREVYETPEQKIRTAIIRLGEVDVLQEIPRVAKQIREQAE
GSVPAISEGFRIGVTEEPYKIPYYAHLLRLLHDPPEGEAEASSSGGTSLGKQILEDFWKG
FQAFLDKLSWRETRLCIHFFAHLTMAKVISVQSMFNLLQSFVAVLDEFGVSHGRAKRAGL
CAAQGLMIAGKVLKEDSVTNVIDIINAIQIYIETTSAAKRLVQPIVHYHAESDTLENADE
LLETALAVLKTLNASDFAETANSYPQPYADLPGLPEGAAPFELPSVLVPPEIIELDGLAA
DTSEDAQVKKEEWPEYYIRLFDNEVTPDPVSPAGYAVRSALLDIVEIFEVNRKECARLLI
EYPKWTLPGTFKPRPGTPAELQPEPAPGKNWQLESTLMEIVLGSLFVLPEATYKAIYYIG
LITEICKLSPSTVGPAVGKSIRRLYASLADGLDVEVARRFAEWFAIHMSNFGFQWVWKEW
VPDVSLTHQHPKRAFMRRAVEFEIRLAYFERIAKTLPEGLQAEGAHVLPEHAPGPDFEYD
EPSNPYHNAAQSVLNLLKGRAKADDVLAHLETLKTTIGETAEGDVNVDSVIRSVAVQSLL
NIGSRSFSHFLNAIERYLAVLRSLSTGGIDARTDILTAVSLFWKRNRQMISIVFDKLMQY
QIVDPTDVVAWTFTNGVGNERGDTEGPSAINAHDWDLLKGALDKANGRVLVARKRVSALR
KEEDDTRARVKASGGDVASMEVDAEAKPDEPPESAALTTAVKAFTSLTTQQKNALARALD
GFIACLAPLSSDRRANPYAREVLTEKAWHNRANWTDDDWNAWETWGWYRHFCRAYSPYLR
SYSTTLGTVSLKKFEGSTDPAALQIVKIWNVSIGEES
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgaaaggccgtattacaacaagaggcggaatcgagatgacttcgacaatcct
cgacgggaagtgtacgagacgccagagcagaaaataagaaccgctatcatccgcctgggt
gaggtggatgttttacaggagatccctcgagtggcgaagcagattcgtgaacaagctgag
ggaagtgtccccgcaatctcggaagggtttcgaataggcgtcactgaggagccgtacaag
attccgtactatgcccatctgctccgccttcttcacgatccccccgaaggagaggcagag
gcctccagtagtggcgggacatcactaggcaaacaaatattggaggatttctggaaaggt
ttccaggcgttcctagataagctgtcatggagagaaacacggttatgcattcacttcttc
gcccaccttactatggcaaaagttatctcagtccagtccatgttcaacctcctgcaatcg
tttgtggctgttctagatgaattcggtgtttcgcatgggcgagccaagagggccggcttg
tgcgctgcacaaggtctgatgattgcggggaaagtgctgaaagaagactccgtaacgaac
gtcatcgacatcatcaatgccattcaaatatacatcgaaactacgtccgctgcaaagcgt
ttggtgcaacctatagtgcactatcacgccgagtcggataccctcgaaaatgctgacgaa
ttattggaaacagctctggcagtattgaagacgctcaatgcctctgactttgccgagaca
gcaaacagctatcctcagccatacgctgatctcccaggcctgcccgagggcgcggctccg
ttcgagttgccatcagtccttgttccccccgagattattgaattggacggccttgcggcc
gacaccagcgaggatgcacaagtaaagaaagaagaatggccagaatactacatccggctc
ttcgataatgaagtgacgcctgacccagtgtctcctgccggttacgccgtacgctctgct
ctgctcgacatcgtggagatcttcgaagtcaatcgtaaagagtgcgcccggcttcttatc
gaatacccgaaatggactctgcccggtacgttcaagccgagacctggtaccccagcggag
ttgcagcccgagccagcccctggcaaaaattggcagctggaaagcacgctcatggagatt
gtccttggatccctgttcgttttaccggaggccacctacaaagccatatattacatcggc
ctgatcactgagatatgcaaactgtcaccgtctacggtcggtcctgctgtagggaagtcc
attcgccgcctatatgcgtccctcgcggatggcctagacgtggaggttgcccggcgtttc
gccgaatggttcgcaatccacatgagtaactttgggttccaatgggtttggaaagaatgg
gtacctgacgtgtccctaacgcatcaacaccccaagcgtgcgtttatgcgcagagcggtg
gaatttgagatcagactggcatacttcgaacggattgccaagacgctccctgaaggtctt
caggccgagggagcccacgtgctgccagagcacgccccaggccctgactttgagtacgac
gagccttcgaatccttaccacaatgcggctcaaagtgtcctgaacctcctgaagggtcgc
gcgaaagcggacgacgtcttggcgcacctcgagactttgaagacgaccatcggcgagacc
gcagaaggtgatgtcaatgttgacagtgtgatccgttctgtcgcagttcagtccctgctg
aacattggttctcggtcgttctctcacttcctcaacgctattgagcgttacctcgctgtc
cttcgtagcctttctaccggcggtatcgatgccaggaccgacatcttgacagccgtgtcg
ttgttctggaagaggaacaggcagatgatttcgattgttttcgacaagctcatgcagtat
cagatcgtggacccgacagatgtcgtcgcctggacgtttacgaacggggtcggcaacgag
aggggtgatactgaaggaccttccgccatcaatgcacatgattgggatttgctgaagggt
gcgctagataaagctaatggaagagtgctcgtggctcggaagagagtgtcggccctgcga
aaggaagaggacgacacgcgagccagagtcaaagcaagtgggggagacgtagcgtctatg
gaggtcgacgctgaggctaagccagacgagcctcctgaatccgctgcgctgactacggcc
gtgaaggctttcaccagtcttaccacccaacaaaagaatgcattggcgcgagcgctggac
ggattcattgcctgcctagcacccttgtcatccgataggcgtgctaacccctacgcgcgt
gaagttcttacggaaaaggcctggcacaatcgcgcgaactggactgacgatgactggaac
gcatgggaaacctggggctggtaccgacacttctgcagagcgtactccccttacctccgc
agttattctactacgcttggcacggtttccctcaagaagttcgaggggtcaacagacccc
gcagcgttacaaattgtcaagatctggaatgtctcaattggagaagagtcatga
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