Guillardia theta: GUITHDRAFT_175494
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Entry
GUITHDRAFT_175494 CDS
T02925
Symbol
NPL4
Name
(RefSeq) NPL4-like protein, forms a complex with UFD1 and CDC48
KO
K14015
nuclear protein localization protein 4
Organism
gtt
Guillardia theta
Pathway
gtt04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
gtt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
GUITHDRAFT_175494 (NPL4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gtt03009
]
GUITHDRAFT_175494 (NPL4)
Ribosome biogenesis [BR:
gtt03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
GUITHDRAFT_175494 (NPL4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPL4
zf-NPL4
UN_NPL4
UBA
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
17309426
NCBI-ProteinID:
XP_005839753
JGI:
Guith1_175494
UniProt:
L1JXH4
LinkDB
All DBs
Position
Unknown
AA seq
656 aa
AA seq
DB search
MIVRIQTREGQARVEVDPSETLEALAAKLQQQLPTIKQFKLSRDPSHKDYLGPAEATLSS
LRIQHGDRIFAQHEESPPSVPHEPEAMTHMVGNSLSGEKVVEILDTVPREHKKKISDIVL
DQVDLELTKMDGREKLKSTSRRSFGDESIDTMAVEPYDERLLKEKDVKLMSFHAYLRKLK
SHSGGGKFSELKRHDFGSYGEAGGKTGTEKGWGERTVSMSRLPKPMTLDRQKYRHVDRVE
IEDPQILDKFLDAWRQTGAMRYGYLYGTYEVDTNVPLGIKAVVKAIYEPPQECAADGVNM
LRDPYSDAIDSTAAMLGLVKVGWIFIDLEVMADDHNKYVCSRGKDTYFLRSNECIIAARL
QNMNPSKCLECDDLEFGSKFVTVVVTGNEKNELDYVAYQVSQQGMDLERAEGILEYTAKP
NLCRVAQSTPDRYVPAIFYQDVSEFGNKMVHEAKPYFPVDYLVVSVNGPTFPQQANPLFK
RNFPIENRMYAPQTLEALKAHLNSPDNKPFRPTGQLKTISDFHLIVYLATHPGLFSSHSD
EGLRILCEAVKERDSNKASEFMQSPAWQNVLRMIDNDKNLSSGDTEMAGAEFGTSIGAAR
SGAMSSSRPATASSAAQYEEQADQLEMMGFDRNRALEILNIVHGNIETAIEMLSGS
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgatagtccgcattcaaacaagggaaggccaggctcgagtcgaagtagatccttctgaa
acccttgaggcgcttgcagcaaagctccagcaacaactccctacgatcaaacagttcaag
ctgagcagagacccttcacacaaagactatcttggcccggcagaggcaactttgtcttct
ttgcgaattcaacatggagacagaatttttgctcagcatgaagaatcacctccaagtgta
ccccatgaaccggaggcaatgacacatatggttggaaattctctttctggagagaaggtg
gtggaaattctggatacagtgccaagagaacataagaagaaaatttccgacattgtcttg
gatcaagttgatcttgaattgactaagatggacggaagagaaaagctaaaatctacctcg
agacgaagttttggtgatgagagcatcgatacaatggctgttgaaccatatgatgagaga
cttttaaaggaaaaggacgtcaaattgatgtcgtttcacgcttatttgaggaaacttaaa
tctcattctggtggaggaaaattctcagagttgaagcgtcatgatttcggtagttacggt
gaagctggaggaaagacaggcactgaaaagggctggggtgaaaggaccgtcagcatgagc
agactgcccaagccgatgacactggatagacaaaagtatcgacatgttgatcgagtggag
atagaagatccacagattcttgacaagttcttggatgcttggaggcagactggagccatg
cgatatggatatttgtatggaacctatgaagtggatacaaacgttcctctaggcatcaag
gcggttgtcaaggccatttatgagccaccccaagaatgtgcagcggatggtgtaaatatg
ttgagggatccgtattctgatgcgatcgattcgactgctgccatgctgggactagtcaaa
gttggctggattttcatcgatcttgaagtgatggctgatgatcacaacaaatacgtctgc
tctcgaggaaaagacacctacttcttaagatcaaacgaatgtattatagctgccagactt
caaaatatgaatccgtccaaatgtctggaatgtgatgacctggaatttggttcaaaattt
gtaacggtcgttgtgactggaaatgagaagaacgagctggactatgttgcttatcaggtt
tctcaacaaggcatggatttggagcgagctgaaggaattctggaatataccgcaaagcct
aatctttgtcgtgtagcccaatcaactcccgacagatatgttccagcgatattctaccaa
gacgtcagtgagtttggaaataagatggtgcatgaggccaagccttattttcctgtcgac
tatcttgtggtcagtgtcaatggccccacatttccccaacaagccaacccgcttttcaag
agaaattttccaatagaaaacagaatgtacgctccacagacgcttgaggcgctcaaagca
catctgaactccccggacaacaagcctttccgccccactgggcagctcaagaccatctcc
gactttcatctcattgtgtacctggccactcacccaggactgttctcttctcatagtgat
gagggccttcggattttgtgcgaggcagtgaaggagagagactcgaacaaagcatctgaa
ttcatgcagtctccagcgtggcagaatgttctacgcatgatcgataacgacaagaacctt
tccagcggcgatacagaaatggcaggtgccgagtttgggacgagcattggcgcagctcga
tcaggtgcgatgagctccagtcggccagcgacggcaagcagcgctgctcagtatgaggag
caagctgatcaattggagatgatgggcttcgatcggaaccgtgctttagagatcttgaac
attgtgcacgggaacatcgagacggccatagagatgttgtctggatcatga
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