Komagataeibacter medellinensis: GLX_10730
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Entry
GLX_10730 CDS
T01631
Name
(GenBank) DNA-directed RNA polymerase beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
gxy
Komagataeibacter medellinensis
Pathway
gxy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gxy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GLX_10730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gxy03021
]
GLX_10730
03400 DNA repair and recombination proteins [BR:
gxy03400
]
GLX_10730
Enzymes [BR:
gxy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GLX_10730
Transcription machinery [BR:
gxy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GLX_10730
DNA repair and recombination proteins [BR:
gxy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GLX_10730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
DUF6218
DOCK-C2
Motif
Other DBs
NCBI-ProteinID:
BAK83485
UniProt:
G2I5T8
LinkDB
All DBs
Position
complement(1226528..1230700)
Genome browser
AA seq
1390 aa
AA seq
DB search
MNAITKSFTGRKRIRKSFGHIPEVAPMPNLIDVQRASYETFLQMNVAPDSRTPTGLQEVF
RSVFPINDFAGRGRLEFVSYELEEPKYDVEECIQRGLTFAAPLKVILRLIVWDVDEDTGS
RSIRDIKEQPVYMGDMPLMTDNGTFIINGTERVIVSQMHRSPGVFFDHDKGKTHSSGKFL
FAARVIPYRGSWLDFEFDSKDLIYVRIDRKRKLPVTTLLYALEGAASEAARAAKAAEGGD
VESMEIRGMDPDEILGYFYGKVEFTKTEKGWARRFDAEAFRGQKLLEPLIDAQTGEEVAP
VDAKLTARMVRKIAETTKEVLVGPAGLIGRFIAQDMVNEHTGEIYAEAGEELTEQKLEEL
EGEGLTTLTTLAIDAANGPWIRNTLAVDKNAAREEALTDIYRVMRPGEPPTPETAEAMFS
GLFFDPDRYDLSAVGRVKMNMRLGVDVPDTVRVLRKEDILRTVKIMCELKDGRGAIDDID
NLGNRRVRSVGELMENQYRVGLLRMERAIRERMGSVDIDTVMPHDLINAKPAAAAVREFF
GSSQLSQFMDQTNPLSEVTHKRRLSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEG
PNIGLINSLATYAKVNKYGFIETPYRMVQDGVLQDGWKYLSAMEEEKLVVAQADAGQDAQ
GHLTDELVSVRRGGDFRQVPPTDVTACDVSPKQLVSVAAALIPFLENDDANRALMGSNMQ
RQAVPLVRSDAPLVGTGMEAAVAHDSGAAIVARRDGVVDQIDGARIVVRATDAGGATQGV
DIYRLRKYMRSNQSTCINQRPLVRVGDAVRAGEIIADGPSTELGELALGRNVLVAFMPWN
GYNFEDSILISERIARDDVFTSIHIEEFEVMARDTKLGQEEITRDIPNVGEEALRNLDEA
GIVYVGAEVNPGDILIGKVTPKGESPMTPEEKLLRAIFGEKASDVRDTSLKLPPGTTGTI
VDVRVFSRRGVDKDERAMAIERAEIERLAKDRDDERAIQERSFYNRLREHLIGQTAGTGF
KGIRSGTEITDEVLSEHPRGAWRNITVASDEVMAELETLRREFDAAVSKIQARFDNKVEK
LQRGDELPPGVMKMVKVFVAVKRKLQPGDKMAGRHGNKGVVSRVVPVEDMPFLEDGTSVD
IVLNPLGVPSRMNVGQILETHLGWACANIGRQVAQLADEYQRHGEKRQELLDELKSVYGD
KVYDEQIGDMTDAQLLELCGNLRKGVPIATPVFDGASIPDIEAMLTRAGVDKSGQSQLID
GRTGEPFERKTTVGYIYMLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEME
VWALEAYGAAYTLQEMLTVKSDDVSGRTKVYEAIVREQDDFEAGIPESFNVLIKELKSLG
LNVDLEQSGS
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgattacgaaatcgttcacgggacgcaaacgcatccgcaagagcttcgggcat
atacccgaggtcgctccgatgcccaatctgatcgacgtgcagcgggcaagctacgagacg
ttccttcagatgaatgtggcgcccgacagccggacgccgacgggcctgcaggaagttttc
cgttcggtctttccgatcaatgactttgccggtcgcgggcgtctggaattcgtcagctat
gagctggaagagccgaaatacgatgtcgaggaatgcatccagcgcggcctgacctttgct
gcgccgctgaaggtgattctgcgcctgatcgtatgggatgtggatgaggataccgggtca
cgctcgatccgtgatatcaaggagcagccggtctatatgggcgatatgccgctcatgacc
gataacggcaccttcatcatcaatgggaccgagcgtgtcatcgtcagccagatgcaccgt
agccccggcgtgttcttcgatcacgacaagggcaaaactcattcctcgggcaagttcctg
tttgcggcgcgtgttatcccttatcgtggctcgtggcttgatttcgagttcgatagcaag
gatctgatctacgttcgcatcgaccgcaagcgcaagctaccagtcaccacgctgctgtac
gcgctcgaaggcgctgcctccgaagccgcgcgtgcggcgaaggccgctgagggcggggat
gtggaatccatggagatccggggtatggaccccgatgagatccttggctacttctatggc
aaggtcgagttcaccaagaccgagaagggctgggcccgtcgtttcgatgcggaagccttc
cgtggccagaagctgcttgagccgttgatcgacgcccagacgggtgaggaagttgccccc
gtcgatgcgaagctcaccgcccgcatggtgcgcaagattgccgagaccaccaaagaagtg
ctcgtcggccccgcgggcctgatcggtcgcttcattgctcaggatatggtcaacgagcat
accggcgagatttatgccgaagccggcgaggaactgaccgagcagaagctggaggaactt
gagggcgaaggcctgaccacgctgacgactcttgccatcgatgcggcgaatggtccgtgg
atccgtaacacgctggccgttgacaagaacgccgcgcgtgaggaagcgctgaccgatatc
tatcgcgtcatgcgccccggcgagccgccgacgcccgagacggcggaagccatgttctcc
ggcctgtttttcgatcctgaccgctatgacctgtccgccgttggccgtgtgaagatgaac
atgcgccttggcgtggatgtgcccgatacggtgcgcgtgctgcgtaaggaagacatcctg
cgcacagtcaagatcatgtgcgaactgaaggatggtcgcggcgcgattgacgatatcgac
aacctcggcaaccgtcgtgtgcgttcggttggcgaactgatggagaaccagtaccgcgtc
ggcctgctgcgcatggagcgcgcaatccgtgagcgtatgggctccgttgatatcgataca
gtcatgccgcatgacctgatcaatgccaagccggctgccgctgcggtgcgtgaattcttc
ggctcatcccagctcagccagttcatggaccagaccaacccactgtccgaagtcacgcac
aagcgtcgtctttcagcgcttggcccgggtggcctgacgcgtgagcgcgcgggctttgaa
gtccgtgacgtacatccgacccattatggccgtatctgcccgatcgagacgccggaaggc
ccgaacatcggtctgatcaactcgctggctacctatgccaaggtcaacaaatacggcttc
atcgagaccccgtaccgcatggtacaggacggcgtgctgcaggatggctggaaatacctt
tccgccatggaagaggaaaagctggtcgtcgcccaggctgatgcggggcaggatgctcag
ggtcacctgacggacgaactggtctcggtccgccgtggtggtgacttccgccaggtgcct
ccgaccgatgtgacggcctgtgacgtctcgcccaagcagcttgtctcggtcgctgctgcg
ctgattccgttccttgagaacgatgacgccaaccgtgcactgatgggctctaacatgcag
cgtcaggccgtgccgctggtgcgctctgacgcgccgctggtcggcaccggcatggaagcg
gccgtggctcatgactctggtgcggccatcgtggctcgccgtgatggtgtggtggatcag
atcgacggtgcgcgtattgttgtgcgcgcaacggatgcggggggtgcgacgcaaggcgtt
gatatctatcgcctgcgtaagtacatgcgttccaaccagtccacctgcatcaaccagcgc
ccgcttgtgcgcgtgggggatgcggtgcgcgcgggtgagatcattgctgatggtccgtcc
accgaactgggtgaactggctctgggtcgtaacgtgctggtcgcgttcatgccctggaac
ggctacaacttcgaagattcgatcctgatttccgagcggatcgcgcgtgatgacgtcttt
acctcgatccatatcgaggaatttgaagtcatggcccgtgataccaaactgggtcaggaa
gaaatcacccgcgacattccgaatgttggtgaggaagcgctgcgcaacctcgatgaagcc
ggcatcgtgtatgttggcgccgaggtgaaccccggtgacatcctgatcggcaaggtcaca
ccgaagggcgaaagcccgatgacgccggaagaaaagcttctgcgcgccatcttcggcgag
aaagcgtctgacgttcgtgacacctcgcttaagctgccgcccggcacgacgggtaccatc
gtggacgtgcgcgtcttctcccgccgtggggtggacaaggacgagcgcgcgatggcgatc
gagcgcgccgagatcgaacgccttgccaaggaccgtgatgacgaacgcgccattcaggag
cgttccttctacaatcgtctgcgcgaacacctgatcggccagacggcgggcacgggcttc
aagggtatccgttctggtaccgaaatcacggacgaggttctgtccgagcatccgcgtggc
gcatggcgtaacatcaccgtggcttccgatgaagtcatggcggaactggaaacgctgcgt
cgtgaattcgatgccgctgtctccaagatccaggcccgcttcgacaacaaggtcgaaaag
ctgcagcgcggtgatgaactgccgccgggtgtgatgaagatggtaaaggtctttgtcgcg
gtaaagcgcaagctgcagccgggtgacaagatggccggtcgccatggcaacaaaggtgtt
gtctcccgcgtggtgcccgtggaagatatgccgttccttgaagatggcacatcggttgac
atcgtactgaatccgctgggcgtgccgtcgcgcatgaacgtggggcagatcctggagacg
catctgggctgggcctgcgccaatatcggccgccaggttgcccagttggccgatgaatac
cagcgccatggcgaaaagcggcaggaactgctggatgaactgaagtcggtctatggcgat
aaggtttatgatgagcagatcggtgacatgaccgatgcccaactgctggagctgtgcggt
aacctgcgcaagggtgtgccgatcgcgacgccggtgttcgatggtgcctccatccccgat
atcgaggcgatgctgaccagggcgggtgtggacaagtccggccagtcgcagctgattgac
ggacgcacgggcgagccgttcgagcgcaagactaccgttggttacatctacatgctcaag
ctgcatcatcttgttgatgacaagatccatgctcgttccatcggcccgtattcgctcgtg
acccagcagccgctgggtggcaaggcgcagttcggtgggcagcgctttggtgagatggaa
gtgtgggcgctggaagcgtacggcgccgcctacacactgcaggaaatgctgacggtcaaa
tcggatgacgtgtccggtcgtaccaaggtgtatgaggctatcgtgcgcgagcaggatgac
ttcgaggccggtatcccggaaagcttcaacgtgctgatcaaggaactgaagtcccttggc
ctgaatgttgacctggaacagagcggttcctga
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