Komagataeibacter medellinensis: GLX_13110
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Entry
GLX_13110 CDS
T01631
Name
(GenBank) single-stranded-DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
gxy
Komagataeibacter medellinensis
Pathway
gxy03410
Base excision repair
gxy03430
Mismatch repair
gxy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gxy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GLX_13110
03430 Mismatch repair
GLX_13110
03440 Homologous recombination
GLX_13110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gxy03400
]
GLX_13110
DNA repair and recombination proteins [BR:
gxy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
GLX_13110
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GLX_13110
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
GLX_13110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
BAK83723
UniProt:
G2I6H6
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All DBs
Position
1505702..1507546
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AA seq
614 aa
AA seq
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MPADLLPSPSATHVGEDGQTPVVLGVTCSVTGRQWHWRAGSQASQTDRMGMAIAQQADLP
EIVGRMLALRGVPPEQVATYLSPTLRALMPNPSVMVEMETAAGRLATAIRNGETVGLFGD
YDVDGACSTALLATFLQEQGCTVLTHIPDRMTEGYGPNTPAIAAMQDNGASLIICLDCGT
AAVEVLEHASLRSDVIILDHHQVQGPLPQVVATVNPNRPDCPSRLHGLCAAAVTFMTLVA
TRRALDEAGWFASRPKPDLMECLDLVALATVCDVMPLSGLNRAFVTQGLTIMARRQRVGL
AALLEVAGARNPLSAFTCGFGVGPRINAGGRIADSGLGLRLLLCTNPAEARVLAERLNSV
NHSRQGVESGILDRAMELAAAQRAQGHAVLVLSGRDWHPGVVGIVAGRIKEKFNRPVLVG
AELDDGSVKGSARSVPGQDLGGAIIAARQAGLLSTGGGHAMAAGFGLPATGLAALQEFLD
RHLATAANLPDAVDLTIDAVVNVAAADVALAEDMNRLAPFGTGNDEPLIALPRVRVAYAE
RIGSERNTLRLTLEGEGRGPRLKALVFRANESPLAPVLEDRDAPPLHLAGWLRAESWNGR
TSATFFIRDVAIAQ
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgcccgctgacctgctgccttccccttccgccacacatgtcggagaggacgggcagaca
ccggtcgttctgggtgtgacatgcagcgtgacaggccgccagtggcactggcgcgcaggc
agccaggccagccagaccgaccgcatgggtatggccattgcccagcaggcggacctgcct
gaaatcgtgggtcggatgctggctctgcggggtgtcccccccgaacaggtggctacctac
ctttcccctaccctacgggcactcatgcccaatccatccgtgatggtggagatggaaacc
gcagcaggtcgccttgccaccgccatccgcaatggtgaaacggtgggcctgtttggcgat
tatgacgtggatggcgcgtgttccaccgccctgctggccacctttttacaggaacagggc
tgcacggtcctgacccacatccccgaccgcatgacggaaggctacggccccaacaccccc
gccattgccgccatgcaggataatggtgccagtctgatcatatgcctggactgcggcacg
gcggcggtagaggtgctggagcatgcaagcctgcgcagtgatgtgatcattctcgatcac
caccaggtccagggcccgctgccccaagtggtggcgacggtcaatcccaaccggccggac
tgcccctcgcgcctgcatggcctgtgtgcggcggcggtcacgttcatgacccttgtcgca
acccgccgcgccctggatgaggcgggatggtttgcctcccggcccaagcccgacctgatg
gaatgcctggacctggtggcgctggccaccgtatgcgacgtgatgccgctgagcggactg
aaccgggcctttgtcacacaggggctgaccatcatggcccggcgccagcgcgtggggctg
gcggccctgctggaggtggcgggggcacgcaacccgctttccgcctttacctgtggcttc
ggggtggggccgcgcatcaacgcaggcggccgcattgccgattcgggactggggctacgc
ctgctgctgtgcaccaaccccgccgaggcccgcgtgctggccgaacggctcaactccgtc
aaccacagccgccagggtgtcgaatccggcattctggaccgtgcgatggagctggccgcc
gcccagcgcgcgcagggccatgccgtgctggtactgagcgggcgggactggcatcccggc
gtggtggggatcgtggccgggcgtatcaaggaaaaattcaaccgtcccgtgctggtcggc
gcggaactggatgatggcagcgtgaaaggctccgcccgctcggtacccggacaggacctt
gggggcgccatcattgccgcacggcaggcggggctgctgtccaccggtgggggccatgcc
atggcggcgggctttggcctgccagccacgggtcttgccgcattgcaggaattccttgac
cgccacctggccaccgccgccaacctgcccgatgcggtggacctgaccatcgatgcggtg
gtgaatgtggccgccgccgacgtggcgctggccgaggacatgaaccggctggcccccttt
ggcaccggcaatgatgaaccgctgatcgccctgccccgcgtgcgcgtagcctatgccgag
cgtattggcagcgagcgcaataccctgcgcctgacgctggagggagaaggccgtggccca
cggctgaaagcgctggtgttccgcgccaatgaaagcccgcttgcccccgtgctggaagac
cgcgatgccccgcccctgcatcttgcgggctggctgcgcgcggaaagctggaatgggcgc
acatcagccacattcttcatccgtgacgtagccatcgcccaataa
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