Komagataeibacter medellinensis: GLX_21780
Help
Entry
GLX_21780 CDS
T01631
Name
(GenBank) DNA/RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
gxy
Komagataeibacter medellinensis
Pathway
gxy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gxy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GLX_21780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gxy03019
]
GLX_21780
03009 Ribosome biogenesis [BR:
gxy03009
]
GLX_21780
Enzymes [BR:
gxy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GLX_21780
Messenger RNA biogenesis [BR:
gxy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GLX_21780
Ribosome biogenesis [BR:
gxy03009
]
Prokaryotic type
rRNA helicases
GLX_21780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
DeaD_dimer
Motif
Other DBs
NCBI-ProteinID:
BAK84590
UniProt:
G2I0Y2
LinkDB
All DBs
Position
complement(2407023..2408795)
Genome browser
AA seq
590 aa
AA seq
DB search
MSFPETHPALQRALDERGYDNPTPVQTAVLDVAAEGRDLLVSAQTGSGKTVAFGLAMADT
LLGGAERFGPAGPPLAVIIAPTRELAMQVTRELTWLYAPAGGRIVSCIGGMDARREARAL
QMGAHIVVGTPGRLCDHQSRGRLDMSELRVVVLDEADEMLDLGFRDELEQLLDAMPKTRR
TLLFSATIAKEIASLARRYQNDAVRIDTLSGAKQHADIEYRAIVADARELIPAVVNVLRY
TDSQTTMVFCATREMVRHMQAALVERGFSSVALSGELGQNERTRAIDSLRKGQANVCVAT
DVAARGIDIPALALVVHATLPTDPATLLHRSGRTGRAGRKGVCVLMVPMSQRRRAERLMQ
GAKITATWSGVPTAAEIRANDAKRLLADPVLNQDVAEADSELVGQLVEGRSSEQLAAALL
QMYRARLPAPENVRHITPDAPRPVRERSERDGPRPTRDSYASAEPGAWFAMNVGRQEKAD
PKWLIPLICRLGGVRKADIGAIRINDTQTLFEITPESTDKFRSCIASIENDEVQISPATA
PAGGPPRRSGPPRGGRSFAPRKPGGGAGRPGGFGGPPRGGASTRKRPPRA
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttcctgaaacccaccccgccctgcaacgcgcgctggacgagcgtgggtacgat
aatcccactcctgtccagactgccgttctggatgttgccgccgaagggcgcgacctgctt
gtttccgcccagaccgggtcgggcaagaccgtcgccttcggcctcgccatggccgacacc
ctgctgggtggggccgaacgctttggcccggcgggtccgccgctggccgtcatcattgca
cccacgcgcgaactggccatgcaggtcacgcgcgaactgacgtggctgtacgcgcctgct
ggcgggcggatcgtctcgtgcattggtggtatggacgcgcggcgtgaagcccgcgccctg
cagatgggtgcccatatcgtggtcggcacgccggggcggttgtgcgatcaccagtcgcgt
ggccgtctggacatgtcggaattgcgcgtggtcgttctggacgaggcggacgaaatgctc
gacctcggcttccgtgacgagcttgagcaactgctcgacgccatgcccaagacacgccgc
actctgctgttctcggccaccattgccaaggaaatcgcgtcccttgcgcgccgttaccag
aacgacgccgtgcgcatcgacaccctgtcgggtgccaagcagcatgccgatatcgaatac
cgcgccatcgtggccgatgcgcgtgaactgattcccgccgtggtcaacgtgctgcgctat
accgacagccagaccaccatggtgttctgcgccacgcgtgagatggtgcgccacatgcag
gcggcactggtggagcgcggcttctcctccgtcgcgctttcgggcgaactggggcagaac
gagcgcacgcgcgccatcgacagcctgcgcaagggtcaggccaatgtgtgcgtggcaacc
gacgtggccgcccgtggcatcgatatccccgcactggcgctggtggtccatgccaccctg
ccgaccgatcccgccaccctgctgcaccgttcgggccgcacgggccgcgcggggcgcaag
ggcgtgtgcgtgctgatggtgcccatgtcacagcgccgccgtgccgagcgactgatgcag
ggcgccaagatcaccgccacatggtccggcgtgccgacggctgccgaaatccgtgccaat
gacgccaagcgcctgctggccgatccggtgctgaaccaggacgtggcggaagctgacagc
gaactggtaggccagctggttgaaggccgcagcagcgaacagcttgccgccgccctgctg
cagatgtaccgcgcccgtctgcccgcgcccgagaacgtgcgccacatcacccccgatgcc
ccgcgccctgtgcgtgagcgttccgagcgtgatggcccccgccccacacgtgacagctac
gccagcgccgaaccgggcgcatggttcgccatgaatgtgggtcggcaggaaaaggctgat
cccaagtggctgatcccgctaatctgccgcctgggtggcgtgcgtaaggcggatatcggc
gccatccgcattaacgatacccagacgctgttcgagatcaccccggaatcgaccgataaa
ttccgctcctgcatcgcctcgatcgaaaatgacgaggtgcagatctctcccgcgaccgca
ccggccggtgggccgccgcgccgcagtggcccaccgcgtgggggccggtcgttcgcgccg
cgcaagcccggcggtggggctggtcgtcccggtggctttggtgggccgccgcgtgggggt
gcttccacacgcaagcgcccgccgcgcgcctga
DBGET
integrated database retrieval system
