KEGG   Komagataeibacter medellinensis: GLX_27310
Entry
GLX_27310         CDS       T01631                                 
Name
(GenBank) DNA helicase
  KO
K03654  ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
Organism
gxy  Komagataeibacter medellinensis
Pathway
gxy03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gxy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GLX_27310
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gxy03019]
    GLX_27310
   03400 DNA repair and recombination proteins [BR:gxy03400]
    GLX_27310
Enzymes [BR:gxy01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     GLX_27310
Messenger RNA biogenesis [BR:gxy03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     GLX_27310
DNA repair and recombination proteins [BR:gxy03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      GLX_27310
SSDB
Motif
Pfam: RQC DEAD Helicase_C HRDC RecQ_Zn_bind ResIII QueC
Other DBs
NCBI-ProteinID: BAK85143
UniProt: G2I3H6
LinkDB
Position
3031406..3033241
AA seq 611 aa
MTTPAGPSRNPRDVLADVFGFPDFRGLQQQAVDEVMAGRDCLVLMPTGGGKSVCYQVPAL
ARPGTGLVISPLIALMDDQVAALRQLGVNAGALHSELEADEAARVRSDLVAGRLDILYVS
PERLLSPGMLERLGRLTLSVIAIDEAHCISAWGHEFRPEYRELAALPQHFPHVPRIALTA
TADARTRSDILEALAMPDATVLKASFHRPNLDIAVRPKTSELRQLTAILDRHRGAASIVY
CGSRSKTERVARSLAGKGYAALPFHAGLSPVEKRAALMRFRSGEPVVIVATIAFGMGIDR
PDVRAVVHLDMPSSPEGYYQQIGRAGRDGEQAETVLLYGGDDMARARYWLEQSNAPDAQK
RIMSARLEAMIALTETTGCRTQSLLSCFGEELDHACGHCDNCRTPVATFDGTVAAQKVLS
AIYRTGQRFGAVHVVGVLRGKGSDMVSRHGHEKLSVFGIGQDRPEPFWRGVIRQLIARGA
IKVTGEYNSLALEEGRARPILRGEEPIMLREDATEDLKAATRTAGGNTRSQRPDLAPDAA
ARYEALRTWRLGEAREQEIPPYVIFHDAVLHDIAMERPTTLDELGMIRGVGGSKLARYGE
AVLNVLAEVGP
NT seq 1836 nt   +upstreamnt  +downstreamnt
atgacaacgcctgcagggccgtcgcgcaacccgcgcgacgtgcttgccgatgtctttggt
tttcctgatttccgcggtctgcaacagcaggccgtggatgaggtcatggccgggcgcgac
tgtcttgtgctcatgcccaccggtggcggcaagagcgtgtgctatcaggtgcctgccctg
gcgcgaccaggcaccgggcttgtcatatcgcccctgattgccctgatggatgaccaggtg
gccgccctgcgccagcttggggtcaatgcgggtgcgctccattcagaactggaagccgat
gaggccgcccgtgtaagatccgacctggtggcgggacggctggatatcctctacgtctcg
ccagagcgactgctctcgccgggcatgctggaacggctgggacggcttacgctgtccgtc
atcgctattgacgaggcgcattgcatttctgcctgggggcatgaattccgccccgaatac
cgcgaactggcggccctgccgcagcatttcccccatgtgccccgcattgccctgaccgca
acggcggatgcgcgcacgcgtagcgatatccttgaagcactggccatgccggacgcaacc
gtgctcaaggccagtttccatcgtcccaaccttgatatcgcggtccggcccaaaacatcg
gaactgcggcaactgaccgccatactggaccggcaccggggggctgcctccatcgtctat
tgtggcagtcgcagcaagaccgaacgcgtggcgcgttcgctggcaggcaagggatatgcg
gcgctgccgttccatgccgggctctccccggtggaaaagcgggccgccctgatgcgcttc
cgttctggtgagccggtggtgattgtcgccaccatcgcctttggcatgggcattgaccga
cccgatgtccgcgctgtggtgcatctggacatgccttcttcccccgaagggtattaccag
cagatcggccgcgcgggccgtgatggcgaacaggccgagaccgtgctgctgtacggtggt
gatgacatggcgcgcgcgcggtactggctggaacagtccaacgcacccgatgcccagaaa
cggatcatgagcgcgcggctggaagccatgatcgccctgaccgagacaaccggctgtcgc
acccagtcgctgctttcctgctttggcgaggaactggaccatgcctgcggccattgcgac
aactgccgcactccggtggccacattcgacggtaccgttgcggcgcagaaggtactctcc
gccatctaccgtaccggccagcgctttggcgcggtgcatgttgtaggtgtactgcgtggc
aaggggtcggacatggtctcacgccatgggcatgagaagctgagcgtgttcggcataggc
caggaccggccggaacctttctggcggggtgtgatccgtcagctcattgcgcgtggcgcg
ataaaggtgacgggtgaatacaattccctggcgctggaggaagggcgcgcgcgccccatc
ctgcgcggggaagagccgatcatgctgcgcgaagatgcgaccgaggatctcaaagctgct
acccgcacggcaggaggaaatacccggtcgcaacgccctgatcttgcgcccgatgcggca
gcgcggtacgaagccctgcggacatggcggctgggagaagcgcgggaacaggaaatcccc
ccctacgttattttccatgatgccgtgctgcatgatattgccatggagcggcctactacg
ctcgatgaacttggtatgatccgtggggttggtggctccaagttggcccgttatggtgag
gccgtgctgaatgtgctggcggaagtcggcccttag

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