Komagataeibacter medellinensis: GLX_27310
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Entry
GLX_27310 CDS
T01631
Name
(GenBank) DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
gxy
Komagataeibacter medellinensis
Pathway
gxy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gxy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GLX_27310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gxy03019
]
GLX_27310
03400 DNA repair and recombination proteins [BR:
gxy03400
]
GLX_27310
Enzymes [BR:
gxy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GLX_27310
Messenger RNA biogenesis [BR:
gxy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GLX_27310
DNA repair and recombination proteins [BR:
gxy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GLX_27310
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
QueC
Motif
Other DBs
NCBI-ProteinID:
BAK85143
UniProt:
G2I3H6
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All DBs
Position
3031406..3033241
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AA seq
611 aa
AA seq
DB search
MTTPAGPSRNPRDVLADVFGFPDFRGLQQQAVDEVMAGRDCLVLMPTGGGKSVCYQVPAL
ARPGTGLVISPLIALMDDQVAALRQLGVNAGALHSELEADEAARVRSDLVAGRLDILYVS
PERLLSPGMLERLGRLTLSVIAIDEAHCISAWGHEFRPEYRELAALPQHFPHVPRIALTA
TADARTRSDILEALAMPDATVLKASFHRPNLDIAVRPKTSELRQLTAILDRHRGAASIVY
CGSRSKTERVARSLAGKGYAALPFHAGLSPVEKRAALMRFRSGEPVVIVATIAFGMGIDR
PDVRAVVHLDMPSSPEGYYQQIGRAGRDGEQAETVLLYGGDDMARARYWLEQSNAPDAQK
RIMSARLEAMIALTETTGCRTQSLLSCFGEELDHACGHCDNCRTPVATFDGTVAAQKVLS
AIYRTGQRFGAVHVVGVLRGKGSDMVSRHGHEKLSVFGIGQDRPEPFWRGVIRQLIARGA
IKVTGEYNSLALEEGRARPILRGEEPIMLREDATEDLKAATRTAGGNTRSQRPDLAPDAA
ARYEALRTWRLGEAREQEIPPYVIFHDAVLHDIAMERPTTLDELGMIRGVGGSKLARYGE
AVLNVLAEVGP
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgcctgcagggccgtcgcgcaacccgcgcgacgtgcttgccgatgtctttggt
tttcctgatttccgcggtctgcaacagcaggccgtggatgaggtcatggccgggcgcgac
tgtcttgtgctcatgcccaccggtggcggcaagagcgtgtgctatcaggtgcctgccctg
gcgcgaccaggcaccgggcttgtcatatcgcccctgattgccctgatggatgaccaggtg
gccgccctgcgccagcttggggtcaatgcgggtgcgctccattcagaactggaagccgat
gaggccgcccgtgtaagatccgacctggtggcgggacggctggatatcctctacgtctcg
ccagagcgactgctctcgccgggcatgctggaacggctgggacggcttacgctgtccgtc
atcgctattgacgaggcgcattgcatttctgcctgggggcatgaattccgccccgaatac
cgcgaactggcggccctgccgcagcatttcccccatgtgccccgcattgccctgaccgca
acggcggatgcgcgcacgcgtagcgatatccttgaagcactggccatgccggacgcaacc
gtgctcaaggccagtttccatcgtcccaaccttgatatcgcggtccggcccaaaacatcg
gaactgcggcaactgaccgccatactggaccggcaccggggggctgcctccatcgtctat
tgtggcagtcgcagcaagaccgaacgcgtggcgcgttcgctggcaggcaagggatatgcg
gcgctgccgttccatgccgggctctccccggtggaaaagcgggccgccctgatgcgcttc
cgttctggtgagccggtggtgattgtcgccaccatcgcctttggcatgggcattgaccga
cccgatgtccgcgctgtggtgcatctggacatgccttcttcccccgaagggtattaccag
cagatcggccgcgcgggccgtgatggcgaacaggccgagaccgtgctgctgtacggtggt
gatgacatggcgcgcgcgcggtactggctggaacagtccaacgcacccgatgcccagaaa
cggatcatgagcgcgcggctggaagccatgatcgccctgaccgagacaaccggctgtcgc
acccagtcgctgctttcctgctttggcgaggaactggaccatgcctgcggccattgcgac
aactgccgcactccggtggccacattcgacggtaccgttgcggcgcagaaggtactctcc
gccatctaccgtaccggccagcgctttggcgcggtgcatgttgtaggtgtactgcgtggc
aaggggtcggacatggtctcacgccatgggcatgagaagctgagcgtgttcggcataggc
caggaccggccggaacctttctggcggggtgtgatccgtcagctcattgcgcgtggcgcg
ataaaggtgacgggtgaatacaattccctggcgctggaggaagggcgcgcgcgccccatc
ctgcgcggggaagagccgatcatgctgcgcgaagatgcgaccgaggatctcaaagctgct
acccgcacggcaggaggaaatacccggtcgcaacgccctgatcttgcgcccgatgcggca
gcgcggtacgaagccctgcggacatggcggctgggagaagcgcgggaacaggaaatcccc
ccctacgttattttccatgatgccgtgctgcatgatattgccatggagcggcctactacg
ctcgatgaacttggtatgatccgtggggttggtggctccaagttggcccgttatggtgag
gccgtgctgaatgtgctggcggaagtcggcccttag
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