Paenibacillus sp. Y412MC10: GYMC10_0868
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Entry
GYMC10_0868 CDS
T01100
Name
(GenBank) D-alanine/D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
gym
Paenibacillus sp. Y412MC10
Pathway
gym00470
D-Amino acid metabolism
gym00550
Peptidoglycan biosynthesis
gym01100
Metabolic pathways
gym01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
gym00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GYMC10_0868
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GYMC10_0868
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
GYMC10_0868
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gym01011
]
GYMC10_0868
Enzymes [BR:
gym01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
GYMC10_0868
Peptidoglycan biosynthesis and degradation proteins [BR:
gym01011
]
Precursor biosynthesis
Amino acid ligase
GYMC10_0868
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
RimK
GARS_A
ATP-grasp_4
ATP-grasp_3
Motif
Other DBs
NCBI-ProteinID:
ACX63168
UniProt:
D3EE45
LinkDB
All DBs
Position
1014154..1015248
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AA seq
364 aa
AA seq
DB search
MGQDKLTVGLVYGGKSGEHEVSLSTAFAVMNAFDFDKYEIVPFYISKQGTWRIGSKMSAP
FARQEELKLAEGEGTQTALNAVFSRLYGEENQAVDIMFPLLHGTFGEDGTIQGLFEMADI
PYVGTGVLASAAGMDKVVMKKLFAQAGLPQCEYCYFNRTQWERSQHEVLKNIEDKLGFPS
FVKPANLGSSVGISKAKNREQLKAAIESALRFDDKIIVEEFVDAREVEVSVLGNDEPMAS
VPGEIVSSSEYYDYAAKYTDGQSQMQIPAEIDPDTADRLRDLAIAAFKAIEGGGITRADF
FVRRSDGAILINEVNTMPGFTPFSMYPLLWRETGVSYRELLDRMIELGLERYHRKQSLIY
ENQA
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgggacaggataaattgacggttggtttagtatacgggggaaaatccggcgagcatgag
gtgtcgctatccacggcattcgcggtcatgaacgcttttgattttgataaatacgagatt
gtcccgttttatatttcaaagcagggaacctggagaatcggcagcaagatgtcggctcct
ttcgcccggcaggaggaattgaagctggctgaaggggaaggcacgcaaacggcgctgaac
gccgtgttcagcagactgtacggggaagagaatcaggcggtcgatattatgttcccgctg
cttcacgggacgttcggcgaggacgggacgatccaggggctgttcgaaatggcggacatc
ccttacgtgggaaccggcgtgcttgcatccgctgccgggatggacaaagtcgtcatgaag
aagctctttgcccaggcaggattgccgcaatgcgagtactgctatttcaaccgcacccag
tgggagcggagccagcatgaagtgctcaagaacatcgaggacaaactcggattcccgagc
ttcgtcaagccggctaacctcggctcgagcgtcgggatttccaaggccaagaaccgggaa
cagctgaaggcagcgattgaatccgcgctccgcttcgatgacaagatcatcgtagaagag
ttcgtcgatgcgcgcgaagtggaggtcagcgtgctcggcaatgacgagccgatggcgtcc
gttccgggtgaaatcgtctcttccagtgaatactatgactacgcggccaaatatacggat
ggacaatcgcagatgcaaatcccggccgagatcgacccggatacggcggatcggctgcgc
gacctggccattgccgccttcaaagcgattgagggcgggggcattacccgcgccgacttc
tttgtccgccgttcggacggtgcgatactgatcaacgaagtgaacacgatgccgggcttc
acgccgttcagcatgtacccgctcttgtggcgggagacgggcgtttcctatcgcgagctg
cttgaccggatgatcgagctgggccttgagcggtaccatcgcaagcaatccctgatttat
gagaaccaggcgtaa
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