Paenibacillus sp. Y412MC10: GYMC10_1962
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Entry
GYMC10_1962 CDS
T01100
Name
(GenBank) ATP-dependent DNA helicase RecG
KO
K03655
ATP-dependent DNA helicase RecG [EC:
5.6.2.4
]
Organism
gym
Paenibacillus sp. Y412MC10
Pathway
gym03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gym00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GYMC10_1962
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gym03400
]
GYMC10_1962
Enzymes [BR:
gym01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GYMC10_1962
DNA repair and recombination proteins [BR:
gym03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GYMC10_1962
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecG_wedge
RecG_dom3_C
ResIII
SecA_DEAD
DUF4606
DUF1611_N
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
ACX64243
UniProt:
D3E5U3
LinkDB
All DBs
Position
2294833..2296884
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AA seq
683 aa
AA seq
DB search
MSLKLDQISVRQINGVSALKEGELHAFGVSTVKDLLEYYPFRYEDYRLRSLSEVKDGDKI
TIQAKIASVPVLQRYGRKSRLTCKMLAENWMFTATWFNRHFLKDQLTAGREIVLTGKWDQ
RRMQLTVSESEFPDKGTFRSGTLQPVYSIGGKITQSWIRKTMGQALEQYGEMIPEILPQS
LLRKYDLMPRKAAIMTIHQPVDSREGQEGRRRMVYEELFLFQLKMQAFRALNRGRMDGVV
HTADNATIREFVRSFPFELTDAQKKVELEILHDMRSPYCMNRLLQGDVGSGKTIVAAIAL
FTTVRSGFQGALMVPTEILAEQHMRSLQKLFEPFGITVGLLTGSVTGKKRKDLLASLQMG
LTDIVVGTHALIQDDVYFRELGLVVTDEQHRFGVNQRSVLRRKGYNPDVLTMTATPIPRT
LAITAFGDMDVSTLSERPKGRIPITTYWVKHELMDRVLGFISREVNQGRQAYLIAPLIEE
SDKLDVQNAIDLHVQMQQAFPAYSVGLLHGRMTPAEKDEVMRQFYSNEVQLLISTTVVEV
GVDVPNATLMIIMDADRFGLSQLHQLRGRVGRGQHASYCVLVADPKSEVGQERMQVMTET
EDGFEVSRRDLELRGPGDFFGTKQSGLPEFRLADMVADFKVVEEARGDAAALVSDSSFWT
SPEYEPLRDFLQQEKIFQGDIMD
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgagtctcaaactcgatcaaatatccgtcagacagatcaacggcgtgagcgccctgaaa
gagggggagcttcacgcctttggcgtctctacggtcaaggatcttttggagtattaccct
ttccggtacgaggattaccggcttcggtccttaagcgaagttaaggacggggacaaaatc
accattcaagccaagattgcgagcgtgccggttctgcagcgttacgggcgcaaatcccga
ttaacctgcaaaatgctggccgaaaactggatgttcaccgcgacttggtttaaccggcat
tttctgaaggaccagcttacggctgggcgggagatcgtgctgacgggcaagtgggaccag
cgcagaatgcagcttacggtgtctgaatccgaattcccggataaaggaaccttccgcagc
ggaacgctgcagccggtgtattccatcggcggaaagattacgcaatcctggatccgaaaa
acgatgggacaggcattggagcaatacggggagatgattcccgagattttgccgcaatcc
ctgctccgaaaatatgatctgatgccccgtaaagcggcgattatgacgatccatcagcct
gtcgactccagggaaggtcaggaagggcggcgccgcatggtgtacgaggagctcttcctg
ttccagttaaaaatgcaggcattccgggcactgaaccggggacggatggacggggtggta
catacggccgacaatgcaaccatccgggagttcgtgcgcagcttcccgtttgagcttacc
gatgcgcagaagaaggtggagctggagattttgcatgatatgcgatccccttactgcatg
aaccgtttgctgcaaggggatgtcggctcgggtaaaacgattgttgccgccatcgcgttg
tttacgacggtccgctcgggcttccaaggcgcattgatggtgccgacggagattcttgcc
gaacagcatatgcgttccctgcagaagctgtttgaacccttcggcattacggtcggattg
ctgacaggcagcgtaacggggaagaagcggaaggacctgctggcttccttgcagatggga
ctgacggacatcgttgtgggcacccatgcccttatccaggatgacgtctacttccgggaa
ctggggctcgtcgtgacggacgagcagcaccgctttggcgtgaatcagcgaagcgttcta
aggcgtaaagggtataacccggacgtgctcacgatgacggcgacgccgatcccgcggacg
ctggccattaccgccttcggcgacatggacgtgtccacgctgtcggagcgtccgaaaggg
cgtattcccattacgacctattgggtcaaacatgaactgatggaccgcgtgctcggattt
atttcccgggaagtaaatcagggacgccaggcatatctgatcgccccgttgattgaggaa
tcggacaagctggacgtccagaatgcgattgacctgcatgttcagatgcagcaggcgttc
cccgcatattccgtcggacttctgcacggccgcatgacgccggccgagaaggatgaggtc
atgcgccaattctacagcaatgaggttcagctgctgatctccacgacggttgttgaggtt
ggcgttgacgtgccgaacgcaaccctgatgatcattatggacgccgatcgcttcggcctg
tcccagctgcaccagcttcggggccgagtaggccgtggacagcatgcttcctattgtgtc
ctggtggctgatccgaagtcggaagtgggtcaggagcggatgcaggtcatgacggaaacc
gaagacggcttcgaggtatcccggcgggatctggagcttcggggaccgggcgactttttc
ggtacgaagcagagcgggctgccggagttccggctggccgacatggtcgccgatttcaag
gtagtcgaagaggcccggggcgacgcggccgctctcgttagcgacagctccttctggacg
tcgccggaatatgagccgctgcgcgactttttgcagcaggagaagatcttccagggcgat
atcatggattaa
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