Paenibacillus sp. Y412MC10: GYMC10_5316 Help Entry GYMC10_5316       CDS       T01100                                  Name (GenBank) ATP dependent DNA ligase   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism gym  Paenibacillus sp. Y412MC10 Pathway gym03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:gym00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     GYMC10_5316  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:gym03400]     GYMC10_5316 Enzymes [BR:gym01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      GYMC10_5316 DNA repair and recombination proteins [BR:gym03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      GYMC10_5316 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_C Motif Other DBs NCBI-ProteinID:  ACX67525 UniProt:  D3EG04 LinkDB All DBs Position 5986363..5987268 Genome browser AA seq 301 aa AA seqDB search MGQLQNLLPKEPMAPISTDQITTGEDWGYQLKWDGVRILAGLDQNRVSLYSRKLLDKTSL YPEVVQALSVLQDRRLLLDGEVVYFHPELGRPVFQKVLQRERSRTVSTSAPLFTYVLFDI LVDGDEDLRKLPYLERHHRLKETVSDIPGLLTADLFLEGEPLWDWAEQRGWEGIVMKRLS SPYREGKKHRDWYKKKIAVNMAASAVAMIIREGRVASLVIADDDGNYIGRASLGLNEQTK KKLLQYAESHRADAIWRTLHTDLKKEQLAWLNQPLSVQVTFLEWSQDGMMRHPKLVSIEG V NT seq 906 nt NT seq  +upstreamnt  +downstreamnt atgggacagttgcaaaatttgctgccgaaagagccgatggctccgatctcgacggatcag attacgacgggcgaagattggggttatcagctgaaatgggatggcgtacgcattctggcc gggcttgaccagaaccgcgtatccctgtattcccgcaagctgctcgacaaaacatccctg taccccgaagtcgttcaggcattatccgtcctgcaggatcggcgtcttctcctggatggc gaggtcgtgtattttcatccggagcttggccgccccgtctttcagaaggttctccagcgg gagcgttcgcgtacggtcagtacgagcgctcctctgtttacttatgtgctgttcgatatc ttggtggacggcgacgaggacttgcgcaagctgccttatctggaacgtcatcatcgtctc aaggagacggtttccgacattccgggcctgctgaccgccgatctgtttcttgaaggcgaa ccgttatgggactgggcggaacagcgcggttgggagggcattgtcatgaagcgcctctcc tcgccataccgtgagggcaaaaagcatcgggattggtacaaaaagaaaattgccgtgaac atggctgcctccgccgtcgccatgatcatcagggaaggtcgcgtagccagcctcgtcatc gcagacgacgatgggaactacatcggccgggcttccctggggctcaatgagcaaacgaag aagaaactgctgcaatatgccgaaagccatcgtgctgacgcgatatggagaacgctccat accgacctgaagaaagaacagctggcctggcttaaccagcctttatcagtccaggtcaca tttctcgagtggagccaggatggcatgatgcgccatcccaaactcgtatcgattgagggg gtgtaa

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