Geobacillus zalihae: IC807_07380
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Entry
IC807_07380 CDS
T07057
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
gza
Geobacillus zalihae
Pathway
gza03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gza00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IC807_07380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gza03019
]
IC807_07380
03400 DNA repair and recombination proteins [BR:
gza03400
]
IC807_07380
Enzymes [BR:
gza01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IC807_07380
Messenger RNA biogenesis [BR:
gza03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
IC807_07380
DNA repair and recombination proteins [BR:
gza03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
IC807_07380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
QNU19408
UniProt:
A0A7H1RYR9
LinkDB
All DBs
Position
complement(1491076..1492599)
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AA seq
507 aa
AA seq
DB search
MDELTKTLHERFGHASFRPGQRDVIEDVLSGRDVLAMLPTGSGKSLCYQLPAYFLPGSVL
IVSPLVSLMEDQVEQLRRRGEKRVVAFHSLLDAEEKWHALTSLPDFRFIYASPEMLQSET
FLAALRRVRVSLFVVDEAHCISQWGYDFRPDFLKLGAVRHALGSPPCLALTATATPEVQE
DIIRTLGMERARRHIYSVDRPNIALAVERCLSVEDKAARLAECAKRLRGPGIVYFSSRQW
AEEMARRLAQNGAGRVAYYHAGMDGEQRLLVQQQFLYDELDIVCCTSAFGMGVDKGNVRF
VLHFHMPAQLEAYVQEIGRAGRDGAPSLAVLFYADGDRAIAQAVAEAELPDSAALREWCR
RLPEDAVRGGWRAAVDAGGFTDIQKRLLAYFLEWGQTAAPEQLTAAAKERLYERMAAAIE
ARRRWKRKKLREMEEWVHAFSCRRAAIVRAFGEEPADKPDACCDNCGLETDRFMTDGRRP
EAAPVRPWREELWHMFFGGRRHDEAAK
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
ttggatgaattaacgaaaacattgcatgagcggttcgggcacgcgtcgtttcggcccgga
cagcgcgatgtgatcgaagacgtgctcagcgggcgcgatgtgctggcgatgctgccgact
ggaagcggcaaatcgctttgctatcagctgccggcgtatttcctcccggggagcgtgctc
attgtctcgccgctcgtctccttaatggaagatcaagtcgagcagctgcgccggcgcggt
gaaaagcgcgttgtcgcgttccatagtttgcttgatgcggaagaaaaatggcacgccctc
acctcgcttccagattttcgctttatttatgcctcaccggaaatgctgcaatctgaaacg
tttttggcggcgctccggcgcgtgcgtgtttcgttgtttgtcgtcgatgaggcgcattgc
atttcacagtggggttatgattttcgcccggactttttgaagctcggagcggtccgccat
gcgctcggttcgccgccgtgtctggcgctgacggcgacggctacgccggaagtgcaggag
gacatcatccgcacgctcgggatggagcgggcgcgtcgccatatttattccgtcgaccgc
ccgaacatcgccttggcggtggaacgttgcttatcggttgaggacaaagctgcgcgcttg
gccgaatgcgcgaaacggctccgaggaccggggatcgtgtacttttcaagccggcagtgg
gctgaagaaatggcgcgccggctggcgcaaaacggggcggggcgggtcgcctattaccac
gccggcatggatggggaacaacggctgcttgtgcagcaacagtttttatatgacgagctc
gacattgtttgttgcacaagcgcgttcggcatgggggtggacaaaggaaacgtccgtttt
gtgcttcactttcatatgccggcccagcttgaggcgtatgtgcaggaaatcgggcgcgcc
gggcgtgacggggcgccaagccttgctgtattgttttacgcggacggcgaccgggcgatc
gcccaggcggtcgccgaagcggagcttcccgactcggctgcgctccgcgagtggtgccgg
cggctgccggaagacgccgtccgtggcggatggcgcgctgcggttgatgccggcggattt
acggacatacaaaaacggctgttggcgtactttttagaatggggacaaacagcggcgccc
gaacagctgacggccgcggcgaaggagcggctgtatgaacggatggccgctgccatcgag
gcgcggcggcgttggaagcggaaaaaattgcgcgaaatggaggaatgggtgcacgccttt
tcatgccggcgcgcggcgattgtccgcgcgttcggggaggagccggcggacaaaccagat
gcttgctgcgacaactgcggcctggagacggaccgtttcatgacggacggccgccgtccc
gaggcggcgcccgtccggccttggcgcgaggagctatggcatatgtttttcggcgggagg
cggcacgatgaggcggcaaagtga
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