Helicobacter apodemus: CDV25_05620
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Entry
CDV25_05620 CDS
T05516
Symbol
trpB
Name
(GenBank) tryptophan synthase subunit beta
KO
K01696
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
had
Helicobacter apodemus
Pathway
had00260
Glycine, serine and threonine metabolism
had00400
Phenylalanine, tyrosine and tryptophan biosynthesis
had01100
Metabolic pathways
had01110
Biosynthesis of secondary metabolites
had01230
Biosynthesis of amino acids
Module
had_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
had00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CDV25_05620 (trpB)
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
CDV25_05620 (trpB)
Enzymes [BR:
had01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
CDV25_05620 (trpB)
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Gene cluster
GFIT
Motif
Pfam:
PALP
Motif
Other DBs
NCBI-ProteinID:
AWI34295
UniProt:
A0A2U8FFT0
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All DBs
Position
complement(1152774..1153979)
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AA seq
401 aa
AA seq
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MKQFYLKQFPNEEGYFGKFGGSFVPESIQKAMQEIDAAYNLIAQNSDFIAELRKIRKHFQ
GRPTPIYFAHNLTREYKGAGIYLKREDLNHTGAHKLNHCMGEALLAKFMGKKKLIAETGA
GQHGVALATAAAYFGLECEIHMGEVDIAKEHPNVVRMKILGAKVIPVSFGAKTLKEAVDS
AFQSYLKDPHNAMYAIGSVVGPHPFPKIVRDFQSIVGIESKEQFLEMTGELPDIVIACVG
GGSNAMGIFSGFIDDSVELVAVEPLGRGEKLGENAATLSYGEEGVMHGFNSIMLKDSKGE
PASVYSIASGLDYPSVGPEHAYLYSIGRTKVATISDKEAIAAFYLLSKKEGIIPAIESSH
ALAYALKIAPNLKGKKILINLSGRGDKDIDFIANTYGYGEV
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaattttatttaaagcaattccctaatgaagaagggtattttggaaaatttggt
ggaagttttgtcccagagagtattcaaaaagcaatgcaagagatcgatgcagcttataat
cttatcgcgcaaaatagtgattttatcgcggaattacgaaaaattagaaaacattttcaa
gggcgtcctactccgatttattttgcacataatttaacaagggaatataaaggggctgga
atttatttaaagagagaagatttaaaccacacaggagcacataagcttaatcattgtatg
ggtgaagcacttttagcaaaatttatgggaaaaaagaaattaattgcagaaacaggggct
ggacagcacggagtggcattagctacagcagcagcttattttgggttagaatgtgagatt
catatgggagaggtggatattgctaaagagcatccaaatgtagtgcgtatgaaaatctta
ggggctaaggttattcctgtaagctttggagcaaaaaccttaaaagaggcggtagattct
gcctttcaatcttatctaaaagatcctcataatgcgatgtatgctattggctctgtagtt
ggtcctcatccctttcctaagattgtccgagattttcaaagtattgtagggatagaatct
aaagagcaattccttgaaatgacaggagagttgccagatatagttatagcttgtgttggg
ggcggcagtaatgctatggggatttttagtggatttattgatgatagtgtagagttagta
gcggtagagcctttggggagaggtgaaaaattaggagagaatgcagcaactttgagctat
ggagaagaaggtgttatgcacgggtttaattcaattatgttaaaagattctaagggagag
ccagcatctgtttatagtatcgcaagtggattagattacccgagtgttggaccagaacac
gcttatttgtatagtattggacgcactaaagtagcaacaatttcagataaagaagccatt
gctgcattttatctcttaagcaaaaaagagggtatcattcctgctattgaatctagccac
gctttagcttatgctctaaagatagccccaaatcttaaagggaaaaaaatccttattaat
cttagtggaagaggggataaagatattgactttatcgctaatacttatggctatggagag
gtttaa
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