Halohasta litchfieldiae: halTADL_1955
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Entry
halTADL_1955 CDS
T05239
Name
(GenBank) peptide chain release factor subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
hae
Halohasta litchfieldiae
Pathway
hae03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hae00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
halTADL_1955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hae03019
]
halTADL_1955
03012 Translation factors [BR:
hae03012
]
halTADL_1955
Messenger RNA biogenesis [BR:
hae03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
halTADL_1955
Translation factors [BR:
hae03012
]
Eukaryotic type
Release factors
halTADL_1955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Motif
Other DBs
NCBI-ProteinID:
ATW88707
UniProt:
A0A1H6QSX1
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Position
complement(1891568..1892815)
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AA seq
415 aa
AA seq
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MSTDADEQPSEDRRKYEFRKVIEELQEYEGSGTQLVTIYIPDDKQVSSVVSHVIQEHSEA
ANIKSKQTRTNVQDALTSIKDRLRYYDTYPPDNGIVIFSGAVDSGGGQTEMVTRVLESPS
EPIQSFRYHCDSDFLTEPLENMLLDKGLFGLIVLDRREANVGWLKGKRIEPVKSASSLVP
GKQRKGGQSAQRFARLRLEAIDNFYQEVAEMADEMMVPKRHDLDGILVGGPSPTKDEFID
GDYLHHELQDMVLGKFDVAYTDESGLSDLVDSASEVLSDQEVVKDKKQMEEFFEKLHVGN
ESTYGFEPTRRNLIMGSVDRLLISEDLRSDVVIYDCDGTDEYEMVDRRHDTPDHECSDGA
EAEVVEREDAIDHLIDIAEQRGTEVKFISTDFEKGEQLLDAFGGVAGILRYSTGV
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgagtacggacgccgacgagcaacccagcgaggaccgacggaaatacgagttccgaaag
gtcatcgaagagctccaagagtacgagggctcggggacacagctcgtcacgatctacatt
cctgacgacaagcaggtctcctctgtcgtctcacacgtcatccaagagcattcggaagcc
gccaacatcaaatccaagcagacccggaccaacgtccaggatgcgctgacctcgatcaaa
gaccggctccgctactacgacacctatccgcccgacaatgggatcgtcatcttctcgggc
gcggtcgacagcggcggcggccaaaccgagatggtcacccgcgtgctcgaatcgccctcc
gagccgatccagtcgttccgttaccactgcgattcggatttcctcaccgaaccactcgaa
aacatgctgctcgacaaaggcctgttcgggctgatcgtcctcgaccgccgagaggccaac
gtcggctggctcaaaggcaaacgcatcgagccagtcaaatctgcgtcctcgctggttccg
ggcaaacagagaaaaggtgggcagtccgcccagcgattcgcccgactccggctcgaagcc
atcgacaacttctatcaggaggtcgccgagatggccgacgagatgatggtaccaaaacgc
cacgatctcgacggcattctggttggcggtccctcgccgaccaaagacgagttcatcgac
ggcgactatctccaccacgagctgcaggatatggtgctcggcaagttcgatgtggcctac
accgacgagtcgggcctcagcgatctagtcgactccgccagcgaggtgctgtcggatcaa
gaggtcgtcaaagacaaaaagcagatggaggagttcttcgagaaactccacgtcggcaac
gagtcgacctacggcttcgagcccacccggcggaacctcatcatgggctcggtcgaccga
ctgctgatctccgaggacctccgtagtgacgtggtgatctacgactgtgacggcaccgac
gagtacgaaatggtcgaccgtcgacatgacacccccgaccacgagtgttcggacggcgcc
gaggcggaggtggtcgaacgcgaggacgcaatcgaccatctgatcgacatcgccgaacag
cgcggcaccgaagtcaaattcatctcgactgacttcgagaaaggcgaacagctcctcgat
gccttcggcggcgttgccggtattctgcgctactcgaccggcgtctag
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