Haemophilus aegyptius: NCTC8502_01788
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Entry
NCTC8502_01788 CDS
T06550
Symbol
uvrB
Name
(GenBank) excinulease of nucleotide excision repair, DNA damage recognition component
KO
K03702
excinuclease ABC subunit B
Organism
haeg
Haemophilus aegyptius
Pathway
haeg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
haeg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC8502_01788 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haeg03400
]
NCTC8502_01788 (uvrB)
DNA repair and recombination proteins [BR:
haeg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC8502_01788 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NCTC8502_01788 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
UB2H
AAA_30
UvrD-helicase
DUF87
AAA_22
CC2-LZ
Ish1
Motif
Other DBs
NCBI-ProteinID:
SQH38077
LinkDB
All DBs
Position
1:1674074..1676113
Genome browser
AA seq
679 aa
AA seq
DB search
MSEKINTKPFILHSDFRPSGDQPQAIEKLAENLTDGLAHQTLLGVTGSGKTFTIANVIAQ
LNRPAMLLAPNKTLAAQLYAEMKAFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASI
NDQIEQMRLSATKSFLERRDTIVVASVSAIYGLGDPDSYLQMMLHLQQGAIIDQRQILAK
LAELQYTRNDQAFQRGTFRVRGEIIDIFPAESDDRAVRIELFDDEIERLSLFDPLTGSSF
GAVPRFTIYPKTHYVTPRERILDAIENIKKELVSRREYFIKEHKLLEEQRISQRTQFDIE
MMNELGYCSGIENYSRYLSGRNEGEPPPTLFDYMPSDAILIIDESHVTVPQIGGMYRGDR
SRKETLVEYGFRLPSALDNRPLRFEEFERLAPQTIYVSATPGAYELEKSGSEIIDQVVRP
TGLLDPLIEIRPVSIQVDDLLSEARQRADKNERVLVTTLTKKMAEDLTDYLDEHGIRVRY
LHSDIDTVERVEIIRDLRLGEFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSL
IQTIGRAARNLNGKAILYADSITKSMEKAITETNRRREKQTKYNEEHGIVPQALNKKVGE
LLDIGQGANQKAKANKQRGKMAAEPTALYNAPKNAKEYQQQIKKLEQQMYKFAQDLEFEK
AAAIRDQLHQLREQFVFDN
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaaaatcaacacaaaaccattcattctgcattccgactttcgtccctctggc
gatcagccacaagctatcgaaaaattggctgaaaatttaacggatggtttggcgcatcaa
actttactcggggtaacaggctcggggaaaacctttactatcgccaatgtaatcgctcaa
ttaaatcgccctgcaatgttacttgcaccgaataaaacccttgctgctcaactttatgca
gaaatgaaagctttttttccagaaaatgcggtggaatattttgtgtcttactatgattat
tatcagccagaagcctatgtgccgagcagtgatacatttattgaaaaagatgcgtctatt
aatgatcaaattgaacaaatgcgactttctgcgacgaaatcttttttagaacgtcgagat
accatcgtggtagcttctgtttctgcaatttatggtttgggcgatcctgatagctattta
caaatgatgttgcatttacaacaaggtgccattatcgatcaacgccaaattttagcgaag
ttagcggaattgcaatatacccgaaatgatcaagcatttcagcgtggaactttccgtgtt
cgcggagaaattattgatattttccctgcggaatctgatgatcgtgcggtgcgtattgaa
ttatttgatgatgaaatcgagcgtttaagtttatttgatccgctcactggtagtagtttt
ggtgctgtaccacgttttacgatctatccaaaaactcactatgtgacgccaagagaacgt
attttagatgcgatagaaaacatcaaaaaagaactggtatcacgccgtgagtacttcatt
aaagaacataaacttttagaagaacaacgtatcagccagcgtacccaatttgatattgaa
atgatgaatgaattgggctattgctcgggcattgaaaactactctcgctatttgtcgggc
agaaatgaaggcgagccaccaccaacattgtttgattatatgccctctgatgccatttta
attattgatgaatctcatgtaactgtgcctcaaattggcgggatgtatcgtggcgaccgt
tcacgtaaagaaaccttagtcgaatatggtttccgtttgccgtccgcattggataatcgt
ccgttacgctttgaggaatttgaacgcttagctccgcaaaccatctatgtttccgcaaca
ccaggggcctatgaattagagaaatcaggcagtgaaatcatcgatcaagtggttcgcccc
actggtttgcttgatccgcttattgaaattcgtccagtgtcaattcaagtggatgattta
ctttccgaagctcgccaaagagcggataaaaatgaacgcgttttagtgacgacgctaacg
aagaaaatggctgaagatttaacggattatttagatgaacatggaattcgtgtgcgttat
ctacattctgatattgatacggtggaacgcgtcgaaattatccgtgatttgcgtttgggt
gaatttgatgtattggttggaattaacttattgcgtgaaggtttagatattccagaagtg
tctcttgtggcgattttagatgctgacaaagaaggatttttacgctccgaacgttcttta
attcaaaccatcggccgagctgcacgaaacttaaatggtaaagcgattttatatgcggat
agcatcacaaaatccatggaaaaagctattactgaaaccaatcgtcgtcgtgaaaaacaa
acaaaatacaatgaagaacatggcattgtgccacaagcattgaataagaaagtcggtgaa
ttattagatattgggcaaggtgcaaaccaaaaagcgaaagccaataaacaacgtggaaaa
atggcggcagaaccaaccgcactttataatgcaccgaaaaatgccaaagaatatcaacaa
caaatcaaaaaactggaacaacaaatgtataaatttgcgcaagatttggaatttgaaaaa
gccgcggctattcgcgatcaattacatcaattacgtgaacagtttgtttttgataactaa
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