Halomonas sp. SF2003: C8233_13220
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Entry
C8233_13220 CDS
T05423
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
haf
Halomonas sp. SF2003
Pathway
haf00540
Lipopolysaccharide biosynthesis
haf01100
Metabolic pathways
haf01250
Biosynthesis of nucleotide sugars
Module
haf_M00063
CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:
haf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
C8233_13220
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
haf01005
]
C8233_13220
Enzymes [BR:
haf01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
C8233_13220
Lipopolysaccharide biosynthesis proteins [BR:
haf01005
]
Lipid A
C8233_13220
BRITE hierarchy
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Paralog
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GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
AVV35569
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Position
3168019..3168870
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AA seq
283 aa
AA seq
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MSNEQRMIEFAGLQVANDRPMTLFGGMNVLESRELALEVAEQYVEVTTRLGMPYVFKASF
DKANRSSMHSYRGPGMEKGLEILAEIKSRFGVPIITDVHEPHQAAAVAEVADVIQLPAFL
ARQTDLVVAMARTGAVINVKKPQFLAPHEMRHIVAKCGEAGSDRILLCERGSSFGYNNLV
VDMLGMAEMKDSGLPVLFDVTHSLQRPGGRADSAGGRREQVFDLARSGVALGLAGLFLEA
HPDPDNAKCDGPCALPLDQLEPFLRQLQSLDALVKGFAPLDIR
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgaacaacgcatgatcgaatttgcgggtctgcaagtcgccaacgatcgtccg
atgacgcttttcggtggcatgaacgtgctcgaatcgcgggagctggcgctggaagtcgcc
gagcagtatgtcgaagtgacgacacgcctgggcatgccgtacgtcttcaaggccagcttc
gacaaggccaatcgcagctccatgcactcctaccgtggtcccgggatggagaaggggctc
gagattctggccgagatcaagtcgcgcttcggtgtgccgatcatcacggacgtgcatgag
ccgcatcaggcggcagccgtggcggaagtggccgatgtcatccagctgccggccttcctg
gcgcggcagacggacctggtcgtggccatggcgcgcaccggcgccgtcatcaatgtcaag
aagccgcagttcctcgcgccgcacgagatgcgccatatcgtcgccaagtgcggtgaagcg
ggcagtgaccggattctgctgtgcgagcgtggctccagcttcggttacaacaacctggtg
gtcgacatgctcggcatggccgagatgaaggatagcggcctgccggtattgttcgatgtc
acccactcgctgcagcgcccgggcgggcgagccgattccgctggcgggcgtcgtgagcag
gtcttcgatctggcacgctccggtgtcgcattggggctggcgggtctgttcctcgaagcg
catccggacccggacaacgccaagtgtgacggcccctgcgccttgccgctggaccagctc
gaacccttcctgcgccagctgcaatcgctggatgcgctggtcaagggcttcgcgccgctg
gacattcgttga
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