Halobacterium sp. GSL-19: JT689_11370
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Entry
JT689_11370 CDS
T07117
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
hags
Halobacterium sp. GSL-19
Pathway
hags02024
Quorum sensing
hags03060
Protein export
hags03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
hags00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
JT689_11370 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
JT689_11370 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JT689_11370 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
hags02044
]
JT689_11370 (ffh)
Enzymes [BR:
hags01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
JT689_11370 (ffh)
Secretion system [BR:
hags02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
JT689_11370 (ffh)
Eukaryotic Sec-SRP protein
JT689_11370 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
nSTAND3
CbiA
ArsA_ATPase
ResIII
Zeta_toxin
APS_kinase
AAA_22
AAA_33
AAA_24
AAA_18
TrwB_AAD_bind
PRK
RavZ_C
SMC_N
KTI12
Motif
Other DBs
NCBI-ProteinID:
QRY22594
LinkDB
All DBs
Position
complement(1817346..1818728)
Genome browser
AA seq
460 aa
AA seq
DB search
MVLDDLGSSLRGTLDTLRGKSRISEEDVDKVVKEIQRSLLQADVDVDLVMDLSESITERS
LEEEPPGGTSARDHVLRIVYEELVGLVGDSTPIPLEEQTIMLAGLQGSGKTTTAAKMAWW
FSKKGLRPAIVQTDTFRPGAYEQAAEMADRAEVDFYGEPDSDDPVQIARDGLAATADADV
HIVDTAGRHALEDDLIAEIEEIEGVVEPDRSLLVLDAAIGQGAKQQARQFDASIGIDGVA
ITKLDGTAKGGGSLTAVNETDSTIAFLGSGETVQDIERFEPDSFISRLLGMGDLKQLTER
VERAMEETQDDDEDWDPEDLMKGEFTLHDMRKQMQAMDNMGPLDQVMDMIPGMGGGLMDE
LPDDAMDVTQERMRGFEVIMDSMTEAEMADPRSVGASQIRRIARGSGQPEDRVRELLDQH
KMMAQTMQQFQGMGDGDMQRMMSKMQQQGGGGGGGFGGMF
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggtactcgacgaccttgggagctcgctgcggggcaccttggacacgctccgcgggaag
tcccgcatctccgaggaggacgtcgacaaggtcgtcaaggagattcagcgctccttgctg
caggccgacgtcgacgtggacctcgtgatggatctctccgagtcgatcacggagcggtcg
cttgaggaggagccgccgggcggaacgagcgcccgcgatcacgtgttgcgcatcgtctac
gaggaactcgtcgggctcgtgggtgattcgacgccgatccccctggaggagcagacgatc
atgctggcgggcctgcaggggtcggggaagacgaccacggccgcgaagatggcgtggtgg
ttctcgaagaaggggctgcggccggcgatcgtgcagacggacacgttccggccgggggcc
tacgagcaggccgcggagatggccgaccgcgcggaggtcgatttctacggggagccggac
agcgacgatcccgtgcagatcgcccgcgacgggcttgcagcgacggcggacgccgacgtg
catatcgtggacacggcgggccgccacgcgctggaggacgacctcatcgcggagatcgag
gagatcgagggcgtcgtcgagccggaccggagcctgctggtgttggacgccgcgatcggg
cagggcgccaaacagcaggcccggcagttcgacgcgtcgatcggcatcgacggggttgcg
atcacgaagctcgacggaaccgcgaagggcggcgggtcgctgacggccgtgaacgagacc
gactccaccatcgcgttcctgggctccggggagaccgtccaggacatcgagcgcttcgag
ccggattcgttcatctcgcggttgctggggatgggggatctcaagcagctcaccgagcgc
gtggagcgtgcgatggaggaaacccaggacgacgacgaggactgggaccccgaggacctc
atgaagggggagttcaccctccacgacatgcgaaagcagatgcaggcgatggacaacatg
gggccactggatcaggtgatggacatgatccccggcatggggggtgggttgatggacgag
ctccccgacgacgcgatggacgtcacccaggagcgcatgcggggcttcgaggtcatcatg
gattcgatgaccgaggcggagatggccgacccgcgctcggtgggggcgtcacagatccgg
cgcatcgcgcgcgggtccgggcagcccgaggaccgcgttcgggagctgctcgaccagcac
aagatgatggcgcagacgatgcagcagttccagggcatgggtgacggggacatgcagcgc
atgatgtcgaagatgcaacagcagggcggtggcggcggtggcgggttcggcggcatgttc
tga
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