Halanaeroarchaeum sp. HSR-CO: HSRCO_2410
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Entry
HSRCO_2410 CDS
T09490
Symbol
gtpbp1
Name
(GenBank) GTPase
KO
K03231
elongation factor 1-alpha
Organism
hahs
Halanaeroarchaeum sp. HSR-CO
Pathway
hahs03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hahs00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
HSRCO_2410 (gtpbp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hahs03019
]
HSRCO_2410 (gtpbp1)
03016 Transfer RNA biogenesis [BR:
hahs03016
]
HSRCO_2410 (gtpbp1)
03012 Translation factors [BR:
hahs03012
]
HSRCO_2410 (gtpbp1)
04131 Membrane trafficking [BR:
hahs04131
]
HSRCO_2410 (gtpbp1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hahs04147
]
HSRCO_2410 (gtpbp1)
Messenger RNA biogenesis [BR:
hahs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
HSRCO_2410 (gtpbp1)
Transfer RNA biogenesis [BR:
hahs03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
HSRCO_2410 (gtpbp1)
Translation factors [BR:
hahs03012
]
Eukaryotic type
Elongation factors
HSRCO_2410 (gtpbp1)
Membrane trafficking [BR:
hahs04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
HSRCO_2410 (gtpbp1)
Exosome [BR:
hahs04147
]
Exosomal proteins
Proteins found in most exosomes
HSRCO_2410 (gtpbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D2
GTP_EFTU_D3
GTP-eEF1A_C
EF-G_D2
ATP_bind_1
Motif
Other DBs
NCBI-ProteinID:
UWG48674
LinkDB
All DBs
Position
complement(2288299..2289897)
Genome browser
AA seq
532 aa
AA seq
DB search
MSGDRALLRTALARGEQEGGSVEFKERLTRELHLASGRRESLAAQLRHRVLSGDGEAMYV
VGVTDGGGIAGISQEAFSETMDVLSLLAEEAGAHIEDVETWGTEDGGLVGVATIVDGGTL
EVADDHLIVGTAGHVDHGKSTLVGSLVTGTPDDGEGGLRSYLDVQPHEIERGLSADLSYG
VYGFDEEGPLRVDNPDRKSDRAAIVEEADRVVSFVDTVGHEPWLSTTIRGLVGQKLDYGL
LTVAADDGPTTTTREHLGVLLATELPTIVAITKADLVSAARVDEVEREVERLLRNADRSP
LPVSRHGVEAAIDEIGDSVVPIVRTSAVSREGLPALDTLFERLPKTARADGDFELYVDRS
YKVAGVGAVASGTVKSGTVDVGDQLQLGPFHDGSYREVEVRSIEMHYHRVDHAEAGRIVG
IALKGVREADVERGMALLAEDADPEPVRAFEAEVMVLNHPTRIHTGYEPVVHLETISEAA
RFDPHGGQLLPGDRGTTTVRFKFKPYHVQEGQRFVFREGRSKGVGTVTDLLD
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcgaccgagccctgctgcgaacggccctggcccgtggggagcaggagggcggc
agcgtcgaattcaaggagcgattgacgcgcgaactccacctggcgagcggccgtcgcgag
agtctcgccgcccagctcagacaccgggttctctccggcgacggcgaggcgatgtacgtc
gtcggcgtcaccgacggcggtggcatcgcaggcatctcccaggaagccttctcggagacg
atggacgtgttgagtctgctcgccgaggaggccggcgctcacatcgaggacgtcgagacc
tggggtaccgaggacggcggtctcgtcggggtggccaccatcgtggacggtgggactctc
gaggtggcggacgaccacctcatcgtcgggacggcgggccacgtcgaccacgggaagagc
acgctggtgggcagtctcgtcaccggcaccccagacgacggcgaaggcggccttcgctcg
tatctcgacgtgcaaccccacgagatcgagcgagggctcagcgccgacctctcctatggg
gtctacggcttcgacgaggagggcccgctccgcgtcgacaatccggaccggaaatcggac
cgtgcggcgatcgtcgaggaggccgaccgggtcgtctcgttcgtcgatacggtgggtcac
gaaccgtggctctcgacgacgatccgcgggctggtcgggcagaaactcgactacggcctg
ctgaccgtcgcggcggacgacgggccgacgaccacgacccgggagcacctcggggtgttg
ctggcgacggagttgccgaccatcgtcgcgatcacgaaagcggacctcgtctcggcggcg
cgcgtcgacgaggtggaacgggaagtggagcgactgctccggaacgcggaccgcagtcca
ctgcccgtctcccgccacggcgtcgaggccgccatcgacgagatcggggactccgtcgtt
ccgatcgtccgcacctccgcggtctcgcgagagggcctccctgctctcgacacgctcttc
gagcgactgccgaagacggccagggctgacggcgatttcgagctgtacgtcgatcgctcg
tacaaggtggccggggtcggcgccgtggcttccgggaccgtgaaatccgggaccgtcgac
gtgggcgatcagctacaactcggtccgttccacgatggctcgtaccgggaggtggaggtc
cggtccatcgagatgcattatcaccgggtcgaccacgcggaggccggccgcatcgtcggt
atcgccctgaaaggggtcagggaagccgacgtcgagcgcgggatggccctcctcgccgag
gacgccgatccggaaccggtccgtgccttcgaggcggaggtcatggtgctcaatcatccg
acgcggatccacacgggctacgaaccggtcgtccacctcgaaacgataagcgaggcggcc
cgtttcgacccccacggtgggcaactcctgccgggcgaccgggggacgacgacggtccgg
ttcaagttcaaaccgtaccacgtccaggagggacagcggttcgtcttccgcgagggacgg
agcaagggggtcggaaccgtgaccgacctactggactag
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