Haloplanus rubicundus CBA1113: DU500_04880
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Entry
DU500_04880 CDS
T05613
Symbol
prf1
Name
(GenBank) peptide chain release factor 1
KO
K03265
peptide chain release factor subunit 1
Organism
haj
Haloplanus rubicundus CBA1113
Pathway
haj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
haj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
DU500_04880 (prf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haj03019
]
DU500_04880 (prf1)
03012 Translation factors [BR:
haj03012
]
DU500_04880 (prf1)
Messenger RNA biogenesis [BR:
haj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
DU500_04880 (prf1)
Translation factors [BR:
haj03012
]
Eukaryotic type
Release factors
DU500_04880 (prf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Phage_Gp84
Motif
Other DBs
NCBI-ProteinID:
AXG05824
UniProt:
A0A345E0V2
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All DBs
Position
complement(976817..978061)
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AA seq
414 aa
AA seq
DB search
MSTDTQDADDDRRKYEFRKVIEDLKEYEGSGTQLVTIYIPPDKQISSVVAHVTQEHSEAS
NIKSKQTRTNVQDALTSIKDRLRYYDTYPPDNGIVVFSGAVDSGGGQTDMVTKVLESPPD
PIQSFRYHCDSDFLTEPLEEMLTDKGLFGLIVLDRREANVGWLKGKRVEPVKSASSLVPG
KQRKGGQSAQRFARLRLEAIDNFYQEVAEMANDLFVAERHELDGILVGGPSPTKDEFLDG
DYLHHELQDKVVGKFDVSYTDESGLYDLVDAAQDVLADQEIMKDKVEMEEFFENLHTGDL
ATYGFEQTRRNLVMGSVDRLLISEDLRKDVVVYDCGGGEEFEVVDRRHATPDHQCDDGSE
AEVKEREDVIEHLMAIAEQRGTETKFISTDFEKGEQLYDAFGGVAGILRYSTGI
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgagtaccgacacgcaggacgccgacgacgaccgtcggaaatacgagttccggaaggtc
atcgaggacctgaaggagtacgagggctccggcacccaactcgtcaccatctacatcccg
ccggacaagcagatctcctcggtcgtcgcccacgtcacgcaggaacactccgaggcgagc
aacatcaagtccaagcagacccggacgaacgtccaggacgccctcacgagcatcaaggac
cgcctccgctactacgacacctaccccccggacaacggcatcgtggtcttcagcggcgcc
gtcgacagcggcggcggccagaccgacatggtcaccaaggtactggagagcccgcccgac
cccatccagtcctttcgctaccactgcgactccgatttcctcaccgaaccgctagaggag
atgctgaccgacaagggcctgttcggcctgatcgtcctcgaccgccgcgaggccaacgtc
ggctggctcaagggcaagcgcgtcgaacccgtcaagtccgcctcgtcgctcgtccccggc
aagcagcggaaaggtggccagtccgcccagcggttcgcccgcctccgcctcgaagccatc
gacaacttctaccaggaggtggcggagatggccaacgacctgttcgtcgccgagcgccac
gaactggacggcatcctcgtcggcggcccgtcgcccacgaaagacgaattcctcgacggc
gactacctccaccacgaactccaggacaaggtggtcggcaagttcgacgtctcctacacc
gacgaatccgggctctacgacctggtcgacgccgcacaggacgtgctcgccgaccaggag
ataatgaaagacaaggtggagatggaggagttcttcgagaacctccacaccggtgacctc
gccacctacggcttcgagcagacccgccggaacctcgtcatgggctccgtcgaccgcctg
ctcatcagcgaggacctccgcaaggacgtggtcgtctacgactgcggcgggggcgaggag
ttcgaagtggtcgaccgccgacacgccacgcccgaccaccagtgcgacgacgggagtgag
gccgaagtgaaagagcgcgaggacgtgatcgagcacctcatggccatcgcggaacagcgc
ggcaccgagacgaagttcatcagcaccgacttcgagaagggcgaacagctctacgacgcc
ttcggcggcgtcgccggcatcctgcggtactcgaccggcatctaa
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