Hemitrygon akajei (red stingray): 140717235
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Entry
140717235 CDS
T11019
Name
(RefSeq) PHD finger protein 1-like isoform X1
KO
K11467
PHD finger protein 1
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
140717235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
haka03000
]
140717235
03036 Chromosome and associated proteins [BR:
haka03036
]
140717235
Transcription factors [BR:
haka03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
140717235
Chromosome and associated proteins [BR:
haka03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
140717235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mtf2_C
Tudor_2
PHD
Prok-RING_1
PHDvar_NSD
PHD_ash2p_like
PHD_NSD
Spore_coat_CotO
ASH2L-like_WH
Motif
Other DBs
NCBI-GeneID:
140717235
NCBI-ProteinID:
XP_072886683
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All DBs
Position
2:complement(158592702..158685397)
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AA seq
678 aa
AA seq
DB search
MKATSPPLLQNSSKVCYPEACSDCRILDTSLCREIVLLDGEKCPRLWEPEGWSLGSLLRS
VRSQPRSVRFRAQTPSRTLLSLPSTMENKPSGRRLKARRDCTPMSKRRARGGAEGTHTRL
WEGQDVLARWSDGLLYLGKIRKVDRWKHICLVRFEDNSEFWEMWKDIYPSALPGSEQVCF
LCSDNTSSQHNLIVTCAKCKQGYHQECHAPPIKADGVAPPSWICRSCVFAVATKKGGALK
KGLYAKAMLAMKQALPYQLESLEWDSQHLTNQQQCYCYCGGPGEWNVKMLQCYRCQHWFH
EACTQCLTKPLLYGDRFYLFLCSVCTGGPEYVKRLPLDWVDIAHLVLYHLTSCCKRKYFD
FEREILAFANENWGTLLVGGLSSTTKTERYNQLLNTLNSHRERFVSGKEIKKKKCIFGLQ
ERLPPPPPPAACLQEMYSKSSVPLLSPSRPPTRSVLEGLKKPKVRRPLRRRDPQDLYALK
TRKARRLLQRAISQNVVVNPSSPNQAYRGSRGSVSACPAWENIERTPPKMMFASIQPSSN
TVRSLESSSSSSLEYGDTTGCPTRAAGGEARLSDGEEGADPPEEEEEEEAEVDDEEEAGE
EGEEEDEEECLDNMADSRSQCDSSDEDLPLSYFCSSVNSYFGAMGRLARGETVRILARRL
TLDNKVQYLVEWGGSSMF
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccacttcccctcccctcttgcaaaattcttctaaggtttgctaccccgaagcg
tgtagtgactgcaggattttagacacaagtttatgtcgcgagattgtactgcttgatggt
gaaaaatgcccccgtctctgggaacctgaaggatggagtttaggatctttgctacgcagc
gttcgcagccaacctcgctccgtgcgcttccgggctcaaaccccctcccgaacccttctc
tccctgccaagcaccatggagaacaagccttcagggagacgtttgaaggccaggagagac
tgcactccgatgagcaagaggagagcccgagggggcgctgaagggacccacactcggctc
tgggagggccaggacgtgctggctcgctggagcgatggcctgctgtacctgggcaagatc
cggaaggtggaccgctggaagcatatctgcctcgttcgcttcgaggacaactccgagttc
tgggagatgtggaaggacatatacccctctgccctcccaggctcggagcaggtctgcttc
ctctgcagtgacaacacctccagccagcacaacctgatcgtcacctgtgcgaaatgcaag
caagggtatcaccaggagtgccatgccccaccaatcaaggctgacggggtggccccaccc
tcgtggatttgccgttcctgtgtttttgccgtggccaccaagaaaggaggagccttgaag
aagggtctctatgccaaagccatgctggctatgaagcaggcgctgccctaccagcttgag
tctttggagtgggactcccagcacctcaccaatcagcagcagtgttactgttactgcggc
ggccctggcgagtggaatgtgaagatgctgcagtgttaccggtgtcagcactggttccac
gaggcctgtacacagtgcctgaccaagcctctgctctatggagacaggttttacctattt
ttgtgcagtgtctgcacaggtggaccagagtatgtgaagcgactgcccctagactgggtg
gacatcgcgcacctggtcctctaccacctcaccagctgctgcaagaggaagtacttcgac
ttcgagcgggagatcctggcgtttgccaacgagaactggggcaccctgcttgtcggaggg
ctctccagcaccacgaagaccgaacgctacaatcagctcctgaataccctgaacagccat
cgggagaggttcgtgtcagggaaggaaattaagaagaagaagtgcatctttggcctgcag
gagcgcctcccccctccaccgccccccgctgcctgcctacaggagatgtacagcaagtcg
tcagtgcctctgctcagtccgtcccgaccccccaccaggtctgtactcgaagggctaaag
aaaccgaaggtgagaagacccttgcgccggagagaccctcaggacctgtacgccctgaag
acgaggaaagctcgacgcctgctgcaaagagccatcagtcagaatgtggtggtgaacccc
tccagcccgaaccaggcctaccgaggcagcagaggcagtgtgagtgcatgccccgcctgg
gaaaacatcgagagaacgcctcccaagatgatgttcgcctccattcagccgtcatctaac
actgtccgcagtctggaatcatcgtcctcctcctctttggaatatggtgacaccacgggc
tgcccgacccgagcagctggaggcgaggcccggctatcagacggtgaggaaggcgctgat
cctcctgaagaagaggaggaggaggaggcagaggtggacgacgaagaggaagcaggggag
gagggagaagaggaggacgaggaagagtgcttggacaacatggcggacagccgctcccag
tgcgactcaagtgacgaggacctgcccctctcctacttctgctcctcggtcaacagctac
ttcggagcgatgggcagactggcgcggggcgagacggtgcggatcctggcccgccgtctg
actctcgacaataaggtccagtacctggtcgagtggggcggctcttccatgttttag
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