Hemitrygon akajei (red stingray): 140718686
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Entry
140718686 CDS
T11019
Symbol
dis3l
Name
(RefSeq) DIS3-like exonuclease 1 isoform X1
KO
K18681
DIS3-like exonuclease 1 [EC:3.1.13.-]
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
140718686 (dis3l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haka03019
]
140718686 (dis3l)
Messenger RNA biogenesis [BR:
haka03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
140718686 (dis3l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_Dis3
CSD2
Rrp44_CSD1
Rrp44_S1
OB_HELZ2
Motif
Other DBs
NCBI-GeneID:
140718686
NCBI-ProteinID:
XP_072888829
LinkDB
All DBs
Position
30:complement(42278180..42342438)
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AA seq
1049 aa
AA seq
DB search
MIKTEKVLHLRSGKGKSVRVVREHYLRESVPCHSCLCQARCHNEGKLLSESATHYVIPDW
KVVQDYLEILEFPELRGIIFMQTACQAVQHQKGRRQYNKLRNLLKDARHECVMFFNEFQL
YSYVPREQGESLEKWQTRCIYYATVWYYNHLAGLMPVVMVTEDTEAIQKYGSETDGVFVV
SFKSYLENFWPDLEAVHQLYESIVQSRKEREIENQENNGKEYSEHLPLEILEAGIKSGRY
VQGVLNVNKHRSQLEAFVRIEGLPNKGSELETDILICGSKARNRAVQGDVVAVELLPRNQ
WKGRVSVLCENESEEKASEEVESEPMATGKVVGIIQRNWRDYVASFPPKEDIQTQGKNVR
KVLVTPWDYRIPKIRITTQQAESLQNFRIIVRIDSWDSTSLYPNGHFVKVLGRAGDLETE
IAAILVENGVSVSPFTEAQLREMPMNTLENPWKIDAEENARRVDLRNTHLVFSIDPKGCE
DVDDALSVRRLANQNLELGVHIADVTHFVKLNSHTDLEARSRATTFYLADRRYDMLPAIL
SAELCSLLGGADRYAVSVLWELDKNNYEVLKVWFGRTIIKSTYKMFYEAAQALLDGDLNV
VDDIPELEGLEEKERYQKLNELIWAIEKLTEIARCMRAKRSLEGGLELEGVELRVQLDEE
KNIKDLVPKQPLEVHETVAECMILANHWVAKKITENFPLQALLRRHPPPRQESFTVLIEC
AKAKRFNIDTRSNKALADSLDMAEDPDDPLVNKLLRSMATQAMSNALYFSTGSCSEDLFY
HYGLALDKYTHFTSPIRRYADIVVHRLLLAALMKDKKLEPEDPLFSQKYLNELCHHINNK
NRAAQRVQKQSVELFQCMYFKDKDPTCDERCIADGIIYSIRANGVLIFVPKYGIKAPAYL
KKKEGHVIATQPDGSCEWKPGSLRRLRDRIISTTADGRSITFSLFEHITVRISEFSSRSH
PDSIKLDIISNRPCKLSSTEPMPETSHTTKTDLVRDVIRSAEEAQLVQEHARRTVIRDED
KEYCQTQGNSLYSLLEEIKEMALLDLSVE
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgattaagacggagaaggtgctgcacctgaggagcggcaaggggaagtcggtgcgtgtg
gtgcgggagcactacctgcgggagtcggtgccgtgccacagctgcctgtgccaggcccgg
tgccacaacgaagggaaattgctctcagaaagtgctacacattatgtgatacctgactgg
aaagtggtgcaagattatctggagatacttgagtttcctgaattaagaggcattatcttc
atgcagacagcttgtcaggctgtccagcaccagaagggacgcagacagtacaacaagctg
cggaacctgctgaaggatgctcgtcatgaatgtgttatgttcttcaatgaatttcagttg
tactcgtatgtcccaagagaacaaggagagtccctagaaaaatggcagaccaggtgcatt
tattatgccacggtctggtattataatcatcttgcaggattaatgccagttgttatggtt
accgaagatacagaagccattcagaagtatgggagtgaaacagatggagtgtttgttgta
tcatttaagagctatttggagaatttttggcctgacctggaagctgtgcaccagctctat
gagtctattgttcagtctcggaaagaacgagagattgaaaatcaggaaaataatggaaag
gaatattcagagcatctgcctttagaaatactggaggctggcattaaatctgggagatat
gttcagggtgttttaaatgtcaacaagcacaggtctcagttggaagcctttgttcgtatt
gagggattgcccaataaaggatcagagctagaaacagacatactcatctgtggctcgaag
gctcgaaatcgtgctgtccagggagatgtggtggctgttgagttactgccaaggaatcag
tggaagggaagagtttcagtgttgtgtgagaatgagtctgaggagaaagcctctgaagaa
gttgaaagtgagccaatggctacaggtaaggttgttggcattattcagcgcaattggcga
gattatgtagcatccttcccaccaaaggaagacatccaaactcagggtaaaaatgttcgg
aaggtcttagttacaccttgggattacagaattcctaaaataagaatcaccactcaacaa
gctgaatccctacagaatttccgaattattgtccgcattgattcctgggattccacatct
ctttatcccaatgggcattttgtgaaggttcttggaagagctggtgatttagagacagaa
attgcagctattcttgtggaaaatggcgtttctgttagcccttttactgaagcccagctg
cgggaaatgcccatgaacactctggagaatccctggaaaattgatgccgaggagaatgcc
agacgtgtggacttaagaaatactcatctcgtcttcagcattgaccccaaaggctgtgag
gatgtggatgatgcactgtctgtccgcagattagcaaatcaaaacttggagctgggcgtt
catattgcagatgttactcactttgtgaaattaaattcacatacagatctggaggctaga
tcaagggcaacgactttctacctagcggatcgacgctatgacatgttacctgccatccta
agtgctgaattatgttcgttacttgggggtgctgacaggtatgcagtcagtgtgttatgg
gaattagacaaaaacaattatgaagtccttaaagtgtggtttggacgaaccataataaag
tcaacgtacaagatgttctatgaagctgctcaggccttgttggatggagatctcaatgtt
gtggatgatatccccgagctcgaagggcttgaggagaaagaaagataccagaagttgaat
gagttgatatgggcaatagagaaactgactgaaatagctcgttgtatgcgggcaaagcgt
tctcttgaaggcggcctggagcttgagggagttgagttgcgagtgcagttggatgaagag
aagaatatcaaggacctggtgccaaagcagcccctggaggtgcatgagactgtagcggag
tgcatgattctggcaaatcactgggtagcaaagaaaattaccgagaacttccctctccaa
gccttgctacgtcgccatcctccaccacggcaggagtcattcactgtactgatcgaatgt
gcaaaagcaaagagattcaacatagatacacgctccaacaaggctctggcagattcactg
gacatggctgaagatccagatgaccctctggtgaataaactcctgcgatctatggccacg
caggcaatgtccaatgctctttatttttccacaggctcctgttccgaagatctcttttat
cattacggccttgctctggacaagtatacacatttcacttcaccaatcagaaggtatgca
gacatagtggtgcacaggctgttgctggcagctttaatgaaggataagaaattggagcct
gaagatccactgttcagccagaagtatttgaatgaattatgtcatcatatcaacaacaag
aatagagctgctcagcgtgtgcagaaacaatctgttgagttatttcagtgcatgtacttt
aaggataaagatcccacttgtgatgaacgttgcatagcagatggtatcatatattcaata
cgtgcaaatggtgtgctgatatttgtgccaaagtatgggataaaagcaccagcataccta
aagaagaaagagggacatgtgatcgcaacacagccagatggatcatgtgaatggaaacct
ggctccctcagacgtcttagagacagaattatctccactacagccgatgggagatccatt
actttctctctctttgagcacatcacagtaagaatctctgaattttcatcccgttcccat
cctgacagcatcaaactggacattatcagtaaccgaccttgtaaactgtccagcacagaa
cccatgcccgaaacctctcacacgacaaaaacagacttggttcgggatgtaatcagatct
gcagaagaggctcagcttgtccaagagcatgcaagaagaacagtcatcagggatgaagat
aaggaatattgtcaaacccagggaaacagcctctactcattgctggaagaaatcaaggaa
atggctcttttagatcttagtgttgaataa
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