Hemitrygon akajei (red stingray): 140735833
Help
Entry
140735833 CDS
T11019
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1-like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haka03019
]
140735833
03041 Spliceosome [BR:
haka03041
]
140735833
Messenger RNA biogenesis [BR:
haka03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
140735833
Spliceosome [BR:
haka03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
140735833
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
Calcipressin
Nup35_RRM_2
NosL
Motif
Other DBs
NCBI-GeneID:
140735833
NCBI-ProteinID:
XP_072917447
LinkDB
All DBs
Position
1:217639701..217708034
Genome browser
AA seq
378 aa
AA seq
DB search
MMMEDDGQPRTLYVGNLSRDVTEALILQLFSQIGPCKSCKMIVETGNDPYCFVEFYEHRH
AAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPF
GRISDARVVKDLATGKSKGYGFVSFYNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAP
KSTSEPNTKQLSYEEVVNQSSPSNCTVYCGGIAVGLTEQLMRQTFSPFGQIMEIRVFPEK
GYSFVRFSSHESAAHAIVSVNGTTIEGHIVKCYWGKETPDGMGQFQQQNQMGYPQPWSQF
GQWYGNTQQFGQYMPNGWQMPPYGVYGQAWNQQGFRMDQTPSTAAWMGANYGVQPPQGQS
PSVITNQAGFGMAGYQTQ
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgatgatggaggacgacgggcagccgagaaccctatatgtgggaaatctctccagggat
gtgacggaagccctaattcttcaacttttcagtcagattggaccatgcaaaagctgcaaa
atgattgttgagactggcaatgatccatattgctttgtggagttctatgagcaccggcat
gcagcagcagcattagccgctatgaatggacgtaaaattatgggtaaggaagttaaagtg
aactgggcaacaactccaagtagccagaagaaagacacaagtaatcatttccatgtattt
gttggtgacttgagtccagaaattaccacagaagatataaaagcagcttttgcaccattt
ggaagaatatctgatgctagagtggttaaagatttggcaactggaaaatccaaagggtat
ggctttgtgtccttctacaataagtgggatgctgagaatgccattcagcagatgggtggg
cagtggcttggaggaaggcagatccgaacaaactgggcaacccggaagccacctgcacca
aagagtacatcagaaccaaataccaaacagttgtcctatgaagaagttgtcaatcaatct
agtcctagcaactgtaccgtttattgtggtggcatagctgttggacttacagagcaactc
atgcgccagacattttcaccctttggacaaatcatggaaattagggtgtttcctgagaaa
ggatattcatttgtacgtttttcatcacatgaaagtgctgcgcatgctattgtctcagtc
aatggaactaccatagaaggacacattgtcaaatgttactggggaaaggaaacacccgat
ggaatgggacaatttcaacaacaaaaccaaatgggctaccctcaaccttggagccagttt
ggccagtggtatggaaatactcaacagtttgggcagtatatgcctaatggctggcaaatg
ccaccatatggagtttatggacaagcttggaatcaacaaggattcagaatggatcagaca
ccatccactgccgcctggatgggtgccaactacggagttcagcctccacaaggtcaaagt
cccagtgtgataaccaaccaagcaggatttggcatggcaggctaccaaacccagtga
DBGET
integrated database retrieval system
