Hemitrygon akajei (red stingray): 140737109
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Entry
140737109 CDS
T11019
Symbol
tprb
Name
(RefSeq) translocated promoter region b, nuclear basket protein isoform X1
KO
K09291
nucleoprotein TPR
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
140737109 (tprb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haka03019
]
140737109 (tprb)
Messenger RNA biogenesis [BR:
haka03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
140737109 (tprb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
140737109
NCBI-ProteinID:
XP_072919388
LinkDB
All DBs
Position
12:63782602..63874297
Genome browser
AA seq
2376 aa
AA seq
DB search
MAASVLQQLLDRAEFAKIPKNVISKIEKLISDKDVEYDVLRAKCERLKVDSEQQYFDVEK
RLTQTQEKLVSETQECQKLREELSTLSDELKETKSKNKDLESSKEKLMNTEGQLSRAKDE
LDNEKRELVRTLERRSQEVEHLNADLKRLNDKLVETNSAKIDLQLKLDELQVSEVSVKYR
EKRLEQEKELLMNQNSWLNTEIKTKTDELVGLRREKSNEILELRCNLENKKDEICSLEEQ
IHTLKAAKQNLEEQVEDLMNKLKESKEQSATMEERFRNELNAHVKLSNLYKSAADDTETK
ATELTRAVEELHSLLKQANEAHKVTEDRLIETETSKTKAVAELNEKIIKLEKELENANHL
LSTTKLKGAATLSEEELAAMSPTAAAVAKIVKPGMKLTELYNGYVEAQDQLLLAKQENKR
VNKYLDEIVKEVEMKAPLLKRQREEYERVQKAVANLSAKLEDAMKEIRRLQKCTDEANKQ
ASLLSRENQRYKMQVSDLSQQNRILLMELEDARGNHILREDEVSSADISSSSEVISQHLV
TYRSVEELQQQNQQLLVTVRELAEKQEKEEKEQTSSQISELQQNLAEALNELERLREARS
HQMQLVESIVRQRDMYRTLLTQMTGVTIPIQGNITEEMPLISSTPKRSPGQTKQLPQLTS
TPAPVPTVESAELVQSRTALKQLQLHFDNYKKEKAANDKILNDQNEKLQEQLTQMRTENM
KLSTQLEFASKRYEMLQNNVDGFRREIASLRDRCQKLTTTVQKQEHIINSMTQDLRASNE
KLALEETRGENLRKEKDMLKMAEIRLTQERDSKFAEHRGQSLLLTNLQSIQLSLERAETE
TRQRLNNQIEKQEREIEKLKRKCEYEVDQRHLLVRNQDIQLMEIKKQLEMESNLHTKTKE
LLKNSEKEVSALKLQLNNLESKLAETKGSDSKGDSNTEEDIDNLRAQLRQAEEHVSDLRE
RLKTTTSNVEQYRDMVLSLEESLSKEKQVTEEVRAAVESRLKESSEYLAQLEKRLLESEN
EKQAITDEKHKAIENLEQQASELKRNLSNLQAELQDAVQRAATAATNEQQARADCQEQAR
LASEAQNKYERELMLHAADVEALQIAKEQVSTNAQERQRLEDASQRAEAQMLECKAAKDE
IERILKDEVSKLTVRCEDLQKQNKLLLEQVESLSNKMVTTVQETAQSSFNTSFNEEGKSQ
EQLLEILRFVRREREIAETRFEVAQVEALRYRQRVENLERELKEVQDSLNSEREKVQVTA
KTLAQHDELMKKTETMNVLIETNKMLRDEKERLEQELQQSRAKVRKLESDILPLQESNIE
LSEKSGTLQAEKKLLDEDLKRWKARAQQLINQQKETDPDEYKKLISEKDTNIKRIQQLTE
ETGRLKTEVARLNASSSVSQRDVQTLKTELNRVSVDRDKLKQEMLARVADIQEKNKTITQ
VKKIGRRYKTQYEELKAQYDKMVAETTSQSTADQQAEQSSAQATQDLQEAFVQSESRAKA
LESQAEALQKSVTEKESEVKKLQEELTQLQGELSRLRQELQEKASLEEQLRQQILEKEEK
TKKAILVAKQKITQLAGLKEQLAKENEELKQHNEEFKQRVSSLDQQREELEVRMSALKSQ
YDGHITRLKRELKEHQERQHEQREEPQELTIKTSEPQRQLDPQRQITLKQTPVSTDRGSS
SSSDPPTANIKPTPLVATPSKVAAGPVPGSKSTPRASIRPMVTPATVTGPATTPTATVMP
TTQVESQEAAIQSEGPVEHVTVFGSTSGTVRSTSPNIPNLSQPILTVQQQQTQATAFVQP
TQQTLQQVEPANQEISTNLADVVQSSPMERPSTSTAVFGTVSGSTPMTKRQREDDEETSA
DNTAHGQEESSEHQSKKVKLTQRAEEHVQEIEESAEAETEMQIQSENLDSQDSITQVVIE
EYPPSQLMEDNEEASHPLDLDPQPLEHQLNTQYSQSSQTPSEYIIIESDEDPDNEEDQEQ
GYEEDDEEEDDDDDTGIEDGDGEDSNEGSPEGEDNYDDGNVEAADGTDPSTDEQTTKEST
QVSEDNSGGEGCVTTTESYTPETPREQQAVVERPASRARRSPRRPPHPLPPRLTIQPPAP
ELGPPAVQRFPPARRPSSSRGGIQLTPGIGGVQQHFFDEDDRMVPSTPTLVVPHRSDGFA
EAIHSPQVAGVPRFRFGPPEDMNQTSSSQSDLGQLASQGGLGMYETPIYLAAVHEDESGG
RSVPTTPLQVHAPVTVFSEGPQTDITEHASQSVPMVATSTSNLSSTVESGGGDDGDEVFI
EGADQEGLSSDVMLEIEGHQEEESAQPSDESDIPSTSQDPPSSSADAAITQPKPLRRVRL
YPQMGRIAARGRQFISRRGMNLSMGGRRGINRGNHS
NT seq
7131 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtctgtgttgcagcagttgcttgaccgcgctgaatttgccaaaataccgaaa
aatgttatatccaagatcgagaagctaatctctgataaagatgtcgaatacgatgttctg
agggcgaaatgtgagcgtttgaaagtagacagcgaacaacaatattttgatgtggagaaa
cgactaacccagacacaggaaaagttagtatcagagactcaagaatgtcagaaattgcgt
gaggaactatctacacttagtgacgaattaaaagaaactaagagcaaaaataaggaccta
gaatcttctaaggaaaaactgatgaatacagagggccagctttctcgtgcaaaagatgaa
ttggataatgaaaaacgagagctagtaagaacacttgaacgtagatcccaagaagtggaa
catctgaatgcggatttaaaacgtctaaatgataaacttgtggaaacaaattcagcaaaa
atagaccttcagttaaaacttgatgagcttcaagtatcagaagtttctgttaagtatcgt
gaaaagcgtctcgaacaagaaaaagaattattaatgaatcagaacagttggttgaataca
gaaataaaaacgaagacggatgaacttgtaggacttcgtcgagaaaaaagcaatgaaatt
ctcgagctccgatgcaatctggagaacaaaaaagatgagatttgcagcctagaagagcaa
attcatacgttaaaagcagctaagcaaaaccttgaagagcaggttgaggatttaatgaat
aaattgaaggagtccaaggaacagtcagcaactatggaagagaggtttcgaaatgaattg
aatgcgcacgtgaagttgtcaaacttgtacaagagtgcagctgatgatactgaaactaaa
gcaacggaacttaccagagctgtcgaggaacttcatagtctactaaaacaggcaaatgaa
gctcataaagtaactgaagatcgtctgattgagacagagacttccaaaaccaaagcagtt
gctgaactaaatgaaaagattatcaaactggaaaaggaactggaaaatgctaaccatctg
ctttcaaccacaaagcttaaaggagctgccactttatcagaagaggagcttgcagccatg
tcacccactgcagcagctgttgctaagatcgtaaagcctggaatgaagctcacagagtta
tataatgggtatgttgaagctcaagatcagttgctattggcaaaacaggaaaataagaga
gttaataaatatttggatgaaattgtaaaagaggtagagatgaaagctccacttctgaaa
cgtcagcgtgaagaatatgaacgcgtgcaaaaagctgtagcaaatctttcagctaaatta
gaagatgccatgaaggaaattcgacgtttacaaaaatgtaccgatgaagcgaataagcaa
gcgtcattgcttagtagagagaaccagagatacaaaatgcaagtgtcagatctttcacag
cagaatagaattcttttgatggaactggaagatgcacgaggaaatcacattttacgtgaa
gatgaagttagttctgccgacataagcagttcctctgaagtaatttctcagcacctggtg
acctatcgtagtgttgaggaactgcaacaacagaatcaacaactgttggtgactgttcgt
gaacttgctgaaaaacaggaaaaggaagagaaggaacaaacttcttcgcaaatttccgaa
cttcagcaaaatcttgcagaggctctgaatgaacttgagcgccttcgtgaagccagaagt
catcagatgcaattagtggaatcaattgttcggcagcgggacatgtaccgtacactgctt
acacagatgactggagtgacaataccaatacagggaaatataacagaagagatgccttta
atatcatccactccaaaaaggtctccaggtcaaacaaaacaattgccccagttgacctcc
acaccagctccagttcctacagtcgagtctgcggaacttgttcaatcaaggactgcacta
aaacagcttcaattacattttgataattacaaaaaagaaaaggcagcgaatgacaaaata
ttaaatgatcagaatgagaaacttcaagaacaattgacacagatgagaacagaaaacatg
aaactgtctacccaactggaatttgcctctaaacgatatgagatgctgcagaacaacgta
gatggattccgccgtgaaattgcttctttgcgagacagatgtcagaagcttaccacaaca
gtgcagaagcaagaacacataataaacagcatgactcaggatttgcgagcatcaaatgaa
aaattggctttagaagagacccgaggagaaaatttgagaaaagaaaaagatatgttgaag
atggcagaaatacgcctgacacaagagcgggattccaagttcgcagaacacaggggacaa
agtttgttactaacaaatttacagtccattcagctgagtttggaacgtgcagaaactgag
accaggcagcgcttaaacaaccagattgaaaaacaagagcgtgaaattgagaaactaaag
agaaaatgcgaatatgaagtggatcaacgtcatttgctcgtcagaaaccaggatattcaa
cttatggaaatcaagaagcagcttgagatggagtctaatcttcacacaaagacaaaagaa
cttctgaaaaactcagaaaaagaagttagtgccttgaagttacaattgaacaatcttgaa
agtaaattggcagagactaagggaagtgattctaaaggtgactcaaatacagaagaagat
atcgataacctccgagcacagcttaggcaagctgaggaacatgttagcgacttgagagaa
cgcctcaagactactacaagcaatgtggaacaatacagagacatggtccttagtctggag
gagtctcttagtaaagagaaacaggtaacagaagaggtacgggctgcagtggaatctcgg
ctcaaagagtctagtgaatatctggcgcagttagagaagcgcttgttggaatctgaaaat
gaaaaacaagctatcacagatgagaagcacaaggcaatagaaaatttggagcaacaggca
tctgaactgaagaggaatctgagcaatcttcaggcagagcttcaggatgccgttcagcga
gcggctactgctgcaaccaatgaacaacaagcaagggctgattgtcaagagcaggctagg
ttggcatctgaagcacagaataaatatgaacgcgagctgatgctgcatgctgctgatgtg
gaagcacttcagattgctaaagagcaagtttcaacaaatgcacaggaacggcagaggttg
gaagatgcttctcaaagggctgaggcacagatgttggagtgcaaggctgccaaggatgaa
atagaaagaatattgaaggatgaagtttccaaactaactgtgcgttgtgaagatctgcag
aaacagaacaaactgttgcttgagcaagtagagagccttagcaataagatggtgactaca
gtgcaagaaacagctcaaagctccttcaatacatctttcaatgaagaaggaaagtcccag
gaacagttacttgaaattctgaggtttgtgcgaagagaaagggaaattgcagaaacaaga
tttgaagtggcccaagttgaggcactgcgttatcgtcagcgtgtggagaatttggagaga
gaactgaaggaggtgcaagacagtcttaactctgaaagggaaaaggtccaggtaactgcc
aaaacactggcacaacatgatgagttgatgaagaagacagagactatgaatgttctgatt
gagaccaataagatgctgagggatgagaaagaaaggttagagcaagaactccaacaatca
agggcaaaggtccgtaagctagaatctgacatcctacctcttcaagaatccaatatcgag
ctcagtgagaaaagtggtacgttgcaagcagagaagaaattactggatgaagatctcaaa
cgctggaaggcccgtgcccagcaattaatcaatcagcagaaggagactgaccctgatgag
tacaagaaactgatttcagagaaagatacaaatatcaaacgcattcaacaactaactgaa
gaaactggcagactgaaaactgaagttgctagactgaatgcatcatcctctgtatcacaa
cgtgatgtgcagacattgaagactgaactcaatagggtgtctgttgatcgggataaacta
aaacaggaaatgttggcaagggtggcagatattcaagaaaagaacaaaactatcacccag
gttaaaaagattggtcgtagatacaagactcagtatgaggagctgaaagcacagtatgat
aagatggttgctgagacgacttctcagagtactgcagatcagcaagcagagcaatcctct
gctcaagccacacaagatttgcaagaagcctttgtacagtctgaatctagagctaaggca
ttagagtctcaggctgaagccctgcagaagtctgtgactgagaaagaatctgaagttaaa
aaattacaggaagaactaacccagttgcaaggtgaactttcccgcttgcgccaggaactg
caggagaaagcaagtcttgaagaacagcttcggcagcagatactggagaaagaggagaag
accaaaaaagctatattagttgccaaacagaagataacacagttagctggtctgaaggag
cagttggcaaaagagaatgaagagttaaagcaacacaatgaagagtttaagcagcgtgtt
agtagtttagatcagcaaagagaggagctggaggtacgcatgagtgcactcaaatcccag
tatgatggtcacattactcgacttaaacgagagctgaaagaacaccaggaacgacagcat
gagcaacgtgaggaaccacaagaactgactattaagacttctgagccacagagacagctg
gatccacagagacaaatcaccttgaaacaaactccagtatcaacagacaggggaagttca
agctcatcagatccaccaacagccaatatcaagcccacccctcttgtggcaacaccaagt
aaagttgccgctggaccagtgcctggcagtaagtccacaccgagagccagtattcgtcca
atggttacaccagcaactgtcactggaccagccacaacgccaactgcaacagtgatgcca
acaacacaagttgaatctcaagaagcagccatacagtcagaaggaccagtggaacatgta
actgtttttggtagcacaagtggaacagtgcgttcaacaagtccaaatatcccaaacttg
tcacagcctattttaacagtccagcagcaacagacacaagcaacagcatttgtacagccc
actcaacaaactcttcagcaggtagagccagcaaatcaggagatttcaacaaacctagca
gatgttgtgcagagctccccaatggaacgaccatccacttccactgctgtatttggaaca
gtttcaggttccactcctatgactaaacgtcaacgtgaagatgacgaagagaccagtgct
gataatacagctcatggtcaggaagagtcttcagaacatcagtcaaagaaagtgaaactc
acccaacgagcggaagagcatgtgcaagagatcgaagaaagcgcagaagcagaaactgaa
atgcagatccagtctgaaaacctggattcacaggactctatcacccaggtggttattgaa
gaatacccaccttctcaactaatggaagataatgaagaggcatctcaccctttggattta
gaccctcaaccattagaacatcagctaaatactcagtattcacaaagttctcaaacacca
agtgaatacattattattgagagtgatgaagatccagacaatgaagaggaccaagagcag
ggatatgaagaggatgatgaagaagaggatgatgacgatgatactggtattgaggatggt
gatggtgaagatagtaacgagggtagtcctgagggagaagataattatgatgatggcaat
gttgaggctgccgatgggacagatcctagtacagacgaacaaactacaaaagaaagtact
caagtttcagaggataattctggaggtgaaggttgtgtcaccaccacagagtcctacaca
ccagagactccaagagagcaacaggcagttgttgaaagaccagcttcacgagctcgacgc
tcaccaaggagaccaccacatcctcttccaccaagacttacaatacaacctccggcccca
gaattggggccacctgctgtacagagatttccaccagcgaggcgaccttcttcaagtcga
ggggggattcagcttactccaggcattggaggtgtgcagcaacatttttttgatgaagat
gacagaatggtgcccagtacaccgacacttgttgtgccccaccgatcagatgggtttgca
gaagccattcattctccccaggttgcaggagtccctcgatttaggtttggaccacctgaa
gatatgaatcaaactagttcaagtcagtctgatcttggacaattggcatcacaaggaggt
ttaggaatgtatgagactcccatttaccttgctgctgttcatgaagatgaatctggaggc
cgcagtgtaccaaccacaccgttgcaagttcatgcaccagtgactgttttcagtgaggga
ccacaaacagatataacggagcatgcctcccagtctgttcctatggttgcaacatccacg
agcaatctgtcgagcacagttgaatctggaggtggtgatgatggtgatgaagtgtttatt
gaaggagcagaccaggaaggtcttagttcagatgttatgttggaaattgaaggacatcag
gaggaagaatctgcccaaccttcagacgaatctgatattccatccactagccaggatcct
ccttccagttcagctgatgctgccatcacacagcctaaacctttgaggagagtacgactt
tatccacaaatggggagaattgcagctcgaggacgacagttcattagccgaagaggtatg
aacctttcaatgggaggaagaagaggcataaacagaggaaatcatagttga
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integrated database retrieval system
