Hemitrygon akajei (red stingray): 140738652
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Entry
140738652 CDS
T11019
Symbol
skic3
Name
(RefSeq) superkiller complex protein 3
KO
K12600
superkiller protein 3
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
140738652 (skic3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haka03019
]
140738652 (skic3)
Messenger RNA biogenesis [BR:
haka03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
140738652 (skic3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_19
TPR_2
TPR_CcmH_CycH
TPR_16
TPR_14
TPR_8
TPR_11
TPR_17
TPR_12
TPR_9
ANAPC3
PPTA
ARM_TT21_C
TPR_20
HAT_Syf1_M
TPR_30
BTAD
RPN7
Fis1_TPR_C
NDUF_B5
ARM_TT21
Motif
Other DBs
NCBI-GeneID:
140738652
NCBI-ProteinID:
XP_072922376
LinkDB
All DBs
Position
2:2050871..2234247
Genome browser
AA seq
1565 aa
AA seq
DB search
MSSKEIKSILKNAREAIRNKEYKEALKHCKAVLKQDKNNYNAWVFIGVAATELDQPEQAK
TAYKKATELEPDQLLAWQGLQNLCEKNNTSDNRHELLGVYQKLIELFESSDKQKWYEVSL
KLIDLYHQQKKYLEAAKTWNRLIQLKQQDGAEKQELHQLWRKMIQLLVGNIESQDSETQQ
LLITAFENALSSLDKIPSDNHQQLSTDYIKFLSTLPHGGDKLKLTCEVLIAQYPNSSSSL
EVLCMYFIQTECFSEEALQCYTRLSAMEPANGLGLIGLGIKEMQEQKYEEAAKYLSEGLK
HARSTIVAWLYLAEIQLRMHKYEEAIDSCRQGVRWLEMNIHNGNSHQKPKLLHLQVEALV
RSGDPNHADLAFGIFEQFPNSEPVLLGMKGQAYLNKGLMEEASQISTDLTRSHPDMSESW
KLQGLIEYTLKNYMQAEQSFRKALKIKADCGDYYFYLGLTFWFMGEETRKDKTKTATHLL
KAAKLDPYNGKIFRYLGHYYQDVVKDKSRARGCYKKAFDLNNRDEEAGAAAVDLSVELED
METALTVLRIVTDHSSAGTAKWAWLRRGLYYLRVNQNSQAIADLQAALRADPKDANCWEC
LGEAYLSRGGYTAALKAFTKANELNPNAVYNIYKIAAIKQIIGKYADAVTEYKQIVQNSE
NYVPALKGLGECYLMMSRSALRDFLDGQALDAAEQALRYLAGAVRYRPDVSCLWKLIGDT
CTTLHVLSAAKLHVQVPLVLFGQGEISNVQTLNKNEVLHLGGRCYVRALTLNSTCASVWC
DLGVNYYRQAQYLASIGEENTVHELLEKSLQCLKKSVMMNSKSHQYWNALGVVASHKGIE
NYALAQHAFIKSVQVEQNNVVAWTNLGATYLKNENIELAHEAFKVAQSLEPSYVMCWIGQ
ALIAEAVGSYETMDLFRHTTELGVNTEGAKGYAHWVCTTLQDKSNRNSELYKYNIVQMNA
ITAAQVVMSKYTERIQTDPVAFTMLGYLNEYLSLKRQAAEAYRRAVVLLQNTKDSEKLPF
ARRNWARALCVAGHYQESIQVYKSNPLVEFDDIIGLALAYFKKGQLQESAKAYEKALSIV
HTEKEKAQILIALAMIEFKCNRMDNAKTFLFKCSMLKEPSIESLQALCALGLLKKDTTLT
TAALNELLKHCDKNSSTYETCLLSSGMFSLQGNSLAVQRQAAKAVHSNPADPALWTLLSR
IIPQHTPQKADGGVVTGNVAQILSSHHSKSAVLFSAVNQLAAGKHAAIDKKDNALKTIQK
AIHLYPDDPTVWASLMAACHMERTLSHLSGTTPKLTANEELFITAISTKIKTNKTMPTFY
LQSLENWSLQQAATGLKEMGRHCDAEAFCTKVLKSHPDHPAVFLLLRQVQCEQLLLSPQQ
LPETVLEELKKAVMSNFTSVTAWHWLAEIYKSQGLMVAAEMCYRQGLQLSSQQGDVSGKL
SSLLRLALLALQLSTLKLQNNRWTSLVKEAAGEAQKICFCPLAALFQALLQFTLKMGARE
TRRLLERVVYQPGYSESIASVARWYLLRHLWAKNDDTLITVLLQNAQLKGDSRVEELYQK
LNESS
NT seq
4698 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtaaagaaataaaatccattttgaaaaatgcaagagaagctattagaaataaa
gagtataaggaggcactgaaacattgcaaggctgttttgaaacaagacaaaaataactac
aatgcttgggtttttatcggagttgctgcaacagagttggatcagcccgaacaagcaaag
actgcatataaaaaagctacagaacttgagcctgaccaactgttagcatggcagggttta
cagaatttgtgtgagaaaaataatacatctgataacagacatgagctcttgggagtttat
cagaagctaatagaactgtttgaaagttctgataaacaaaaatggtatgaggtcagctta
aaattaatcgatctctatcatcaacagaaaaaatacttagaggctgctaaaacatggaat
cgattaatacagctaaaacaacaagatggagctgagaagcaagaacttcatcaattgtgg
aggaagatgatccagttacttgttggcaatatagagagtcaagatagcgagactcaacaa
ttgttgatcactgcatttgaaaatgccctttcatctctggacaagattccgagtgacaat
catcagcagctttctactgactacattaaatttctatcaacattgccgcatggaggagat
aagctaaaactaacttgtgaggtattgatagctcagtatcctaattcgtcatcttcactg
gaagtactgtgcatgtatttcatccaaacagagtgcttcagtgaagaggctctgcagtgt
tatacaaggcttagtgcgatggaacctgcaaatggactcgggcttattgggcttgggatc
aaagaaatgcaagaacaaaaatatgaagaagctgcaaaatacctaagcgaaggcttaaag
cacgcacggtcgacaattgtagcctggctttatctagcagaaatccagctccggatgcac
aagtatgaagaagcaattgactcttgcagacaaggtgtgagatggttggaaatgaatatc
cataatggaaacagtcatcaaaagcccaaacttcttcatttgcaagtagaagctctggtc
aggtctggtgacccaaatcatgcagatctcgcctttggtatctttgagcagtttcccaat
agtgaacctgtgctacttggcatgaaaggtcaagcttatttgaacaaaggtctgatggaa
gaagcatctcagatttcaacagatcttactagatctcatcctgacatgtccgagtcatgg
aaactacaaggactcattgaatatactctgaaaaattatatgcaggcggaacaaagtttc
cggaaagctctgaaaatcaaagcagactgtggagattattacttctaccttggactgact
ttctggttcatgggagaggagacgagaaaagataaaactaaaactgctacacatttatta
aaggctgctaagttggacccatacaatggaaaaatatttcgctatttgggccactactat
caagacgtagtcaaagataaaagcagagcccgaggctgctataaaaaagccttcgacctc
aacaaccgtgatgaagaagcaggcgctgcagctgttgatcttagtgttgaacttgaagat
atggaaaccgctcttacagttctgagaatagtgactgatcattcgagtgctgggaccgca
aaatgggcttggctcagacgaggactttattacctgagagtcaaccagaattcacaagct
attgcagacttgcaagcagctttgagagcagacccaaaagatgccaattgctgggaatgt
ttaggagaggcttatctcagccgaggaggttatacagctgctttaaaagccttcacaaaa
gccaatgaactcaatccaaatgctgtctacaacatttacaagatagcagccatcaaacag
atcattggcaagtatgctgatgcagtcacagagtataaacaaatagttcaaaattcggaa
aactatgtgccagccctcaaaggattaggtgaatgctatttaatgatgtcccgaagtgcc
ctcagagatttcttggatggacaagccttggatgcagctgaacaggcgctacggtactta
gctggagctgtgaggtatcgacctgatgtgtcttgcctatggaaactaattggagacacg
tgtaccacactccatgtcctgtcagcagcaaagcttcatgttcaagtccctttagttctc
tttggacagggtgaaatttctaatgtgcaaacattaaacaaaaatgaagttcttcaccta
ggaggaaggtgctatgtgcgagcccttacgttgaactctacatgtgccagtgtgtggtgt
gaccttggtgtgaattattaccgacaggcacaatacctagccagtataggagaagaaaat
acagtgcatgagttgctggaaaaatcactacagtgccttaaaaagtctgtgatgatgaac
agcaaaagtcatcaatactggaatgcacttggagttgttgccagtcacaaaggtattgaa
aattatgctctcgcacagcatgcatttattaaatctgttcaggttgaacaaaataatgtg
gtggcatggaccaacctgggggcaacttatctgaagaatgaaaacattgagcttgcccat
gaagcctttaaagtagcccagtctttggaaccctcatatgttatgtgctggattggacag
gcacttatagcagaagctgtcggcagctatgagacaatggacttgttcagacatacgact
gagcttggtgtcaatactgaaggagctaaaggttatgcacattgggtttgcacaacactg
caggataaatcaaacagaaattccgaactgtacaaatacaacattgtacagatgaatgca
ataactgctgcgcaagttgtcatgagcaagtatacagagagaattcagactgatccagta
gctttcacaatgttgggttacttgaatgaatatctaagcctgaagagacaagcagcagag
gcatatcgcagagcagttgtgctgttacaaaatacaaaagacagcgagaaacttccattc
gctcgaagaaattgggctcgagccttatgtgttgcaggtcactatcaggaatccatccag
gtttataagtcgaatcctctcgtggagtttgatgacattattggacttgccttagcttat
ttcaagaaaggacaacttcaggagagtgccaaagcttatgaaaaggctttaagtattgtc
cacacggagaaagagaaggctcagatattgattgcactggccatgattgagttcaaatgc
aacagaatggacaacgctaagacttttcttttcaagtgctccatgttgaaagagcccagt
atagaaagtctgcaggcactgtgtgctttgggactcttgaagaaggacaccaccctaact
acagcagcactgaatgaactactcaaacactgtgataagaacagttccacttacgaaacc
tgccttctgtcttcaggaatgttttctttgcaaggtaacagtttagctgtacagagacag
gcggcaaaagctgttcatagcaatccagctgatcctgccctttggacattattgtccagg
atcattcctcaacacactccccaaaaggcagatggtggggtcgtgacaggtaatgtcgca
cagatcctaagttctcatcattcaaagagtgctgtgttgttcagtgctgttaaccagtta
gcagcaggaaaacatgccgcaattgataaaaaggataatgcattaaagaccattcaaaag
gcaattcatctgtatccagatgatcccactgtgtgggccagtttaatggcagcatgccac
atggagagaacattatctcatctgagtggtacaacacctaaactgactgcaaatgaggag
ctgttcattacagcaatctctacaaaaataaaaacaaataagaccatgccaacattctat
cttcaatccctggagaactggtctctgcaacaggctgcaactgggctcaaagaaatgggc
aggcattgtgatgcggaagccttctgcactaaggtacttaagagccacccagaccatcct
gcagtgttcctcttgttgagacaagttcagtgtgagcaactcttgctttccccccaacag
cttccagagacagttttagaagagctaaagaaggcagtgatgtcaaacttcacatcagta
acagcttggcattggttggcagaaatatataaatctcagggtttgatggtagctgcggag
atgtgctacaggcaaggattgcagctgtcttcccaacaaggtgacgtgagtggcaagttg
tcaagtctgctccggttagcactgctcgctcttcagctcagcacgttaaaacttcagaac
aatcgatggacatccctggtgaaggaagcagctggtgaagctcagaagatctgcttctgc
cctcttgctgctctgtttcaagctcttctgcaatttacactgaaaatgggagcaagggag
acccgacggctgctggagagagtcgtgtatcagccaggttattctgaaagcatcgcatca
gttgcacgctggtacctcctccgacatctgtgggccaaaaatgatgacacacttattacg
gttttacttcagaatgcacaactgaaaggggattccagagtcgaagaactgtaccagaag
cttaatgagtcatcataa
DBGET
integrated database retrieval system
