Hemitrygon akajei (red stingray): 140740515
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Entry
140740515 CDS
T11019
Symbol
cngb1a
Name
(RefSeq) uncharacterized protein cngb1a
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
140740515 (cngb1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
haka04040
]
140740515 (cngb1a)
Ion channels [BR:
haka04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
140740515 (cngb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Ribosomal_60s
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
140740515
NCBI-ProteinID:
XP_072925826
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All DBs
Position
17:complement(18370647..18515545)
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AA seq
1399 aa
AA seq
DB search
MFTWIAKVAPQPPQPVQHLETRPEAKGGSAPAEEQETVKAEKSKNEASGCCDAEGVQGEA
DQAADTSSGSGVLVWIVQRMSRFNLQHIDSPRLPKAASDSEKNAGNKEKELSQESTTPPP
APEPAPPPAPEPAPPPAPEPAPPPAPEPAPPPAVAPALVPEKAPAPNVQLSGQPSVGGAP
SDQYQQDKDRGGGVLSWIVQGLKGVLPQPEEKRKPTEAAEVSSAPQAIKEEPVNPQKEEP
AIDTKPEPEIKPQQEAEVKEEVVATEAPEEPIDQQAECSTSSAPTGTIIETLHSSASGNS
LFEWLKQSLEKVIPQPTGITMPASAKVETESITESKVPVEEKDPEVKVAEITEEVSKAVT
IIEVAPAEPTPDPVVKEEKEAMPEGTAKTSEEDKSVFSWLVQGLGKVVPQPVTRSQLPKE
DVETTAACSAEEAPSEMVLEDVDSDWDEEAQCHDAEAQSGECETLEQLTKQAIRIEVTPV
GSSQLWNITEEPEPETDPMLPCEEIESNEDVQLTGPVLIPEEVSCCEDTPATDSRQEKEC
EESDQNEDPPVIDTTEEEPSSEDLPPVLLVQVCEEDICTEDLPPADDQNSVCPEDTEQIV
QPCYDEVVEYQLIEAAEASHQHEEEEVLKTKLEQEDPPNASWPSVKIEDVDSEGDSLKSG
QNKLPPIESSSSTSKGRTLAVPSIHKTARSSVKDLENKPSSHEASAEEPAQELHGEAWQS
QTSLQVDDSFRSQQGSTSSITSAIVNERLQELVKLFKERTEQVKEKLIDPDASEDEGSPT
ASPSKAAPAAPAPPPEEKKEEEEKEEEHYCEMMCCRFKTRPWLRRIKSVGLPSSVDPFSN
PLYVLWLSIVVLAWNWNVWLIPVRCTFPYQTPDNIHLWLLMDYFCDLIYLTDMIVFQSRL
QFVKGGDIITARKLMRENYLKTQKFKMDLVSLLPLDILYLKLGFRVLLRVPRLLKYMTFL
EFNDRLEAIMSKAYIYRVIRTTIYLLYSLHINSCLYYWASDYEGIGSTKWVYDGEGNSYM
RCYYWAVKTLITIGGLPDPETVFEIFFQLVNYFMGVLIFSIMIGQMRDVVGAATAGQTYY
RTCMDNTVRYMNLYKIPRGVQTRVRKWYEFTWESQGMLDETELLVQLPDKMRLDIAIDVN
YSIVNKVALFQGCDRQMVYDILKRLKSVVYLPGDYVCKKGEIGREMYIIKAGEVQVVGGP
DDKTVFVTLRAGSVFGEISLLSVGGGNRRTANVVAHGFANLFILDKKDLNDILIHYPDSQ
KLLRKKAKKLLSKDGGKAVKPEPKGFQHIIPPRPETPKLFLAALSVAGKYGIKGTFSVIK
KKLMESASMQPIPQPPPSPVHRRSPVLVKKPEDVDDDDDEVISETMDSSVTIKMSPSRDG
LKEQILSVEVPDVEEKSEK
NT seq
4200 nt
NT seq
+upstream
nt +downstream
nt
atgtttacctggattgctaaagttgctccacaacccccacagccagttcaacatctagag
accaggcctgaggctaaaggtggctccgcacctgcagaggaacaggaaacagtgaaggct
gaaaaatctaaaaatgaagcaagtggctgttgtgatgcagaaggagtacagggtgaggct
gaccaggctgcagacaccagttctgggagtggagtcctggtctggattgtgcagcgaatg
agcagatttaacctacaacacattgatagcccaaggcttcctaaagctgcgtctgattcc
gagaagaatgcagggaataaggaaaaggaactaagccaagaatccacaacacctcctcca
gctccagaaccagcacctcctccagcgccagaaccagcacctcctccagctccagaacca
gcacctcctccagctccagaaccagcacctcctccagctgtggctccagcactagttcca
gagaaagctccagctccgaacgtccaattatcaggtcaaccatctgttggaggagcccca
tctgaccagtatcagcaagacaaggacagaggaggtggagtcctcagctggattgtgcaa
gggctcaaaggggtattgccacaacctgaagaaaaacggaaaccgaccgaagctgctgaa
gtgagctctgcccctcaggcgataaaagaggaacctgtaaatccacaaaaagaagaacca
gccattgacacaaagcctgagccagagatcaaacctcagcaagaagctgaagtgaaggag
gaagttgtggccactgaagctcctgaagaacccattgatcaacaggcagaatgctcaaca
agctctgctcccactggcaccatcattgaaacacttcactcatccgcaagtggaaacagc
ttatttgaatggctgaaacagagtctggagaaagtgattccacaaccaacagggatcacc
atgcctgcctcagccaaagtggaaactgaatcaataacagaaagcaaggttccagtggaa
gagaaggatccagaggtgaaggtggcagaaattacagaggaagtatcaaaagcagtcact
atcatagaagttgctccagcagagcccaccccagatcccgtagtgaaggaagagaaggaa
gcaatgcctgagggaactgctaagaccagtgaggaggacaaaagtgtcttcagttggctg
gtacaaggacttgggaaagttgtgccacaaccggtcaccagatcccagttaccaaaggag
gatgttgagacaactgctgcatgttctgcagaagaagctccaagtgagatggtgttggaa
gatgttgattctgattgggatgaagaggctcagtgccacgatgctgaagcacaatcaggt
gaatgtgagacactggagcagctcacgaaacaagccataagaattgaagtgacaccggtg
ggttcaagccagctgtggaatatcacagaggaaccagaacctgagacagatccaatgctg
ccgtgtgaggaaatcgaaagcaatgaagacgtgcaattgacagggccagtgctgatacct
gaggaagtcagctgctgtgaggatactccagcaacagacagcagacaggaaaaggagtgt
gaagaaagcgaccagaatgaggatcccccggttattgacacaacggaagaagaaccaagc
agtgaggacctgccaccagttctcctggtgcaggtatgtgaagaagacatatgcactgag
gatttaccgcctgcagatgaccagaatagtgtctgccctgaggacacagagcagattgtg
caaccatgttatgacgaagtggtcgaatatcaattaattgaagctgctgaagcgagccac
caacatgaggaggaggaggttctgaagactaagttagaacaagaagatcctcctaatgcc
tcgtggccttcagtgaaaattgaagatgtggattctgaaggagattctttaaaatcagga
cagaataagttgcctccaattgagtcatcctcctcaacaagcaagggcaggacacttgca
gtgcccagcatccacaagacagcacgaagttctgttaaggatttggaaaataagccatca
tcccatgaagccagtgcagaggagccagcccaggagttacatggtgaagcttggcaaagc
caaacaagtcttcaggttgatgatagtttcagatctcagcagggttcaacatcaagcatt
accagtgctattgttaatgagcgcctccaggaattggttaaactctttaaagaacgaacg
gaacaggtcaaagaaaagcttattgaccctgatgcatccgaggatgagggaagtccaact
gcatcaccctcgaaggcggctccggcagctcctgccccacccccagaggagaaaaaggag
gaggaagaaaaggaggaggagcactactgtgaaatgatgtgctgccggtttaaaacaaga
ccttggctcaggcgaatcaaatccgtgggacttccatccagcgttgatcctttcagcaac
cctctgtatgttctgtggttgtccatcgtggtattagcctggaactggaatgtttggtta
atccccgtgcgctgcacctttccctaccaaacacccgataacatccatctatggctatta
atggattatttctgtgatctgatttacctgacggacatgattgttttccagtctcgtctc
cagtttgtaaaaggaggagacattataacagcacggaagcttatgagagaaaactacctc
aaaacccagaaatttaaaatggacttggtgtcccttttgcctttggatattttgtacctt
aaactaggtttcagagtattgctgagagttccacgcctcttgaagtacatgacctttctt
gaatttaatgatcgactggaagcaataatgagcaaggcttatatttacagagtgataagg
acgacaatatacttactgtatagtctccacataaatagttgtctatactattgggcatct
gactatgagggcattggatccacaaagtgggtttatgatggtgaggggaacagttatatg
aggtgctattactgggctgtgaagactctgattacaatcggagggctacctgacccagag
acagtgtttgaaattttctttcagcttgtcaactacttcatgggagtcctcatcttctct
atcatgatcggccagatgagagatgtggtgggtgcagctactgcgggacagacttactat
cgaacctgtatggataacaccgtgagatacatgaacttgtacaaaattcctcgaggtgtc
cagacgcgggtgcggaagtggtatgaatttacctgggagtcacaaggaatgttggatgaa
accgagctattggtacagctccctgacaaaatgagactggacatcgccattgatgtcaac
tacagcattgtcaataaagtcgcactcttccagggctgtgacagacagatggtttacgac
atactgaagcgactcaagtcagttgtgtatctgcctggagactacgtttgtaagaaggga
gagattgggagagaaatgtacatcattaaagctggagaggtccaggtcgttggtggccct
gatgataagactgtgttcgtgactctgcgagcaggctccgtgtttggtgagatcagtttg
ctgtcagtgggaggcgggaaccggcggactgcaaatgttgtcgctcatggatttgcaaat
cttttcatcctcgacaagaaagacttgaatgacattctcatccattatccggattctcag
aaactgctccgaaagaaagctaaaaaacttctttctaaagatggtgggaaagcagtaaag
ccagaaccaaaaggattccagcacatcatcccacccagacctgagactcctaaattattt
ctcgcagccctctcagtagcagggaagtatggaatcaaaggaacattctctgttattaag
aagaaacttatggaatctgccagcatgcagcctatcccacaacctcctccctctcctgtt
catcgccggtcacctgttttggtaaaaaagccggaggacgttgatgatgatgatgatgag
gttatttcagaaacaatggattcctctgtcacaatcaagatgtctccttcacgtgatggg
ttaaaagaacaaattctgtccgtggaggttccagatgtagaagaaaagtcagaaaagtga
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