Hemitrygon akajei (red stingray): 140741913
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Entry
140741913 CDS
T11019
Symbol
sema3h
Name
(RefSeq) sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3H isoform X1
KO
K06840
semaphorin 3
Organism
haka Hemitrygon akajei (red stingray)
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sema
ig
Ig_2
Ig_3
V-set
Ig_6
PSI
I-set
Motif
Other DBs
NCBI-GeneID:
140741913
NCBI-ProteinID:
XP_072928577
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Position
19:complement(49693332..49902371)
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AA seq
790 aa
AA seq
DB search
MSRISCVPRLSPDPSGRRFTFSLRRLILQVFSLCLLGDRAAIAWRPSQTRLRLTFPELML
HKRIIPLSFSASNLHSIILDEDNRRLYAAAKDYLLTCNLDNISERVKKLHWPATAERIDE
CKMAGKDPHLDCANFLRILHFYNQTHLYVCGTGAFHPRCAFIDTSIFNRDELLTLNHEQT
ECGKGKCPYDPQQRIASAMIGGELYAGISSDFMSRDTAFFRSLGHRRVIRTEQYDPTWLQ
DPKFVKVHAIAESNNEEDDKVYLFFTERAQEVDSGNGKVVYSRVARVCKNDIGGQRSLVN
KWSTFLKARLICSIPSSEGIQTHFDELQDVFILHGKDKKNPLIYGVFTTSSNILNGSAVC
VYKMADIIMAFKGEFAHKEGPDYKWMTYPGRVPYPRPGTCPSTTYGSYRSTREYPDEAIF
FIRTHPLMHDAVYPVNHRPVLVRVGMDYKFTRLAVDRVEAVDGQYDVMFIGTDTGLVLKS
IYSPKENHEVEEIVLEELEVFQDKAPITSMKLSKKRQWLYLGSKSGLAQVSLYQCDLYGR
GCAECCLARDPYCTWNGSSCSTYLPSTRRRLTRQVTLNGDPLTQCFNQGGAMYTWTEEKV
LFVVEGNSTYLECIPKSRLATVTWFLEQTEKNGLLQEVTFGDRIIPIEQGLLIRQINHHD
AGVYHCQIEDHGLRWTLTKVRLNVVTADLLANLYEGDGRSAGPMKDWSLPGPGHGIQPWY
KNIMSLINYPSKMDFYCEQVWQKDFKKKRNRLRSGKKHRSVEPMRKSKATVGGRRNRDKQ
HKLQRSPRST
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggatcagttgtgttccccgtttatctccggatcccagtggacgtcggttcacc
ttcagtctccgcaggctcatcctgcaggttttctctctgtgcctgctcggggaccgggcg
gcgatcgcgtggagaccatcgcagaccaggctccggctcaccttcccagagctgatgtta
cataaaaggatcatccccttgagcttcagtgcctcaaacttgcattccattattctggac
gaggacaaccgaagactgtacgcagcagcaaaggactatcttctgacctgtaacctggac
aacatctcagagagagtgaagaagttacactggccagctacggctgagcggatagacgaa
tgcaagatggctggcaaggaccctcatctggactgtgctaacttcttgaggattctccac
ttctacaaccaaactcatctctatgtctgtgggaccggagctttccatccacgctgtgca
ttcattgacacgtccatattcaacagagatgagctgctaacgctgaaccacgagcagaca
gaatgtggcaaggggaagtgtccgtatgaccctcagcagcgaatcgcctcagcaatgatt
gggggagagttgtatgctgggatctcctctgatttcatgagtcgggacacggcattcttc
cggagcctggggcatcgccgtgtgatccgcactgagcagtacgatcctacatggctccaa
gatcccaagtttgtgaaggtccatgccatcgccgagagcaacaacgaagaggatgacaaa
gtgtatttatttttcaccgagcgcgctcaggaggtggacagtggcaacgggaaggtggtc
tactcgcgagtggctcgggtttgcaagaatgacatcggtggtcaacgcagtctggtcaac
aaatggagtaccttcctaaaggcaaggcttatctgctccattccaagttctgagggaatt
caaactcactttgatgaactacaggatgtctttattcttcatgggaaagataaaaagaat
ccattgatctatggagttttcacaacatccagcaatattctcaatgggtcagctgtctgt
gtttacaagatggccgacattataatggccttcaaaggggaatttgcgcacaaagagggt
cctgactacaagtggatgacgtatccaggacgtgtgccttatcctcgccctgggacgtgc
cccagcaccacatatgggagctacagatcaacccgtgaatacccggatgaggcaatcttc
ttcatccgcacccacccactcatgcacgatgccgtctatccggtgaaccatcggccagtg
ctggttcgggttggcatggactacaagtttactcgtctcgctgtggaccgggtcgaggca
gtggacggacaatatgatgtgatgtttattggaactgacaccgggttggtcctgaaatct
atctactctcctaaagaaaaccatgaggtggaagagatagttctggaagagctagaggtt
ttccaggacaaagcaccaatcacatcaatgaagctgtccaagaagcggcagtggctgtat
ttaggttcaaagagtggcttggcccaggtgtccttgtaccagtgcgatctgtacggcaga
ggttgtgcggaatgttgcctggcacgagacccttactgcacctggaacggaagctcttgc
agcacctacttgcccagcactcgcagaagactcactcgccaggtcactctgaatggagac
cctctgacccagtgcttcaaccagggaggggccatgtacacttggactgaagaaaaggta
ttgttcgttgttgagggaaacagcacgtatttggaatgcattcccaaatctcggcttgcg
acagtcacgtggttcctagaacaaaccgaaaagaatgggctgctgcaggaggttaccttt
ggggaccggatcattccaattgagcaaggtttgctgattcgtcaaatcaatcatcatgat
gctggtgtctatcattgccaaattgaggatcatggtttgcgctggacactaacgaaggtg
cgactcaatgtggttactgctgacctgctggcaaatctgtacgaaggtgatggacggtca
gctggccccatgaaggactggtctcttccaggccccggtcacggcattcagccctggtac
aagaacatcatgagcctcatcaattacccatccaagatggacttttactgtgagcaggtc
tggcagaaagacttcaagaagaaacggaacagattacgttcaggcaaaaagcaccgcagc
gtggagcccatgaggaaaagcaaagctacagtgggaggcagacggaacagggacaaacag
cacaagttacagcgatctccccgcagcacctaa
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