Haliaeetus albicilla (white-tailed eagle): 104315523
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Entry
104315523 CDS
T08398
Symbol
CNOT1
Name
(RefSeq) LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
hald
Haliaeetus albicilla (white-tailed eagle)
Pathway
hald03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hald00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104315523 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hald03019
]
104315523 (CNOT1)
Messenger RNA biogenesis [BR:
hald03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104315523 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
104315523 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
NOT1_connector
CNOT1_CAF1_bind
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
104315523
NCBI-ProteinID:
XP_009913832
LinkDB
All DBs
Position
Unknown
AA seq
2372 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIDNPLHYQKSLKPSPHLFAQLSKVIK
LSKVQEVIFGLALLNSFSSDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGIAKTMMESSLADFMQEVGYGFCTSVEECRNIIMQFGVREVTAAQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKSDGAQAHTWNVEVLIDVLKELNPSLDFKVVTYE
LDHPGFQIRDSKGLHIVVFGIQRGLGMEVFPVNAIYRPWKHAEGQLSFIQHSLINPEIFC
FADYPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDSLAGMASL
SLGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTQNQTTGFSGIGGLSSQLPVGG
LTTGSLTGIGTGALGLPAVNNDPFVQRKLSTSGLNQPTFQQSKMKPSDLSQVWPEANQHF
SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSNIKREREVFNCMLRNLFEEYR
FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFASKMYYFGIAALDR
FKNRLKDYPQYCQHLASISHFIQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQA
QAQAQVPAKAPLAGQVSTIVTTSTTTTVAKTITITRPTGVSFKKDVPPSINTTNIDTLLV
ATDQTERIVEPPENVQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVS
IEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLG
MITLAKNKPILHTDLDVKSXXXXXXXELLYVVPFVAKVLESSVRSVVFRPPNPWTMAIMN
VLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGSLLKDKDRLKNLDEQLSAPKKDVK
QPEELPPITTTTASTTPATSTTCTATVPPQPQYSYHDINVYSLGGLAPHITLNPTIPLFQ
AHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRVAAHHM
MRNLTAGMAMITCREPLLMSIATNLKNSFATALRAASPQQRDMMEQAAAQLAQDNCELAC
CFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRLKVGGV
DPKQLAVYEEFARNVPGFLPTNDLTQPTGFLAQPMKQAWATDDVAQIYDKCMTELEQHLQ
SIPHTLAMNPQAQALRSLLEAVVVARNSRDAIAALGLLQKAVEGLLDATSGADADLLLRY
RECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQQYDL
HLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHVTEADLFHTIETLMRINAHSRGNAPE
GLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWVNLYH
SAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCTEMCVEISYRAQAEQQHNPAAN
PTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLLQDHDVRQSE
FQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPGFVYAWLELISH
RIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILYKGTLRVLLVLLH
DFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVDMLSEINIAPRI
LTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYNIQLINALVLYVGT
QAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNSHTHYF
SCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPAFKFWNHEFVH
CAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7119 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
accaagaaaaactaccgagccagccagcaggaaatacagcatattgtgaataggcacggt
cccgaggcagacaggcatttattacgctgtctattctcgcacgtggatttcagtggcgat
ggtaaaagcagtggcaaagattttcatcagactcaatttctgatccaggagtgtgcgtcg
ctgattacaaaaccaaactttatctcgacgctgtcctacgccattgacaatccgttgcac
tatcagaagagtctgaagccttcaccccatttatttgcccaattgagtaaagtcatcaaa
ttaagtaaagttcaagaggtgatttttggtctcgctttactgaactctttcagctcagat
ctacgaggttttgctgcccagtttataaaacagaaactcccggatcttttgcgctcttac
attgacgcggacgtcagtggaaatcaagaaggtggcttccaagatattgcaatagaggtc
ctgcaccttctcctctcccatctcctttttgggcagaagggagcctttggggtaggacag
gaacagattgacgcgttcctcaaaacattacgtagagattttcctcaggagcgttgccct
gtggtgcttgcaccacttctataccctgaaaaacgggacattctaatggacaggatcctg
cctgattctggagggatagccaaaaccatgatggagagttctctggcagatttcatgcag
gaagttggctatggcttttgcacaagtgttgaagaatgtcgcaacataatcatgcagttt
ggtgttcgggaagtcacggctgcccaggttgccagggttttggggatgatggctcgaact
cattcggggttgacggatggtattccattacaatctatttcggctcctggcagtgggatt
tggagtgacgggaaggataaaagtgatggagcacaagcccatacctggaatgtggaggtc
ttaattgatgttcttaaagagctgaatcctagcctggacttcaaagtagtaacctatgaa
ttggaccatccgggatttcagattcgtgacagcaagggcctgcatatagtagtgtttggc
atccagagagggcttggcatggaagtttttccagttaatgccatatacagaccttggaag
cacgcagagggccagctctcctttattcaacattccctcataaaccctgaaatcttctgt
tttgctgactacccttgtcatactgttgccacagacatcctgaaagcaccaccagaggat
gacaatcgagaaattgctacatggaagagcctggatttgattgaatctctgttacgattg
gcagaagtgggacagtatgagcaggttaagcagctcttcagttttcctatcaagcattgc
ccagatatgttggtattggccttattgcagatcaacacgtcctggcataccttgcgccat
gaactcatctccacactcatgccaattttccttggtaaccatcccaactctgccatcatt
ttgcactatgcatggcatggacagggtcagtctccttcgattcgtcagcttatcatgcat
gcaatggcagaatggtacatgagaggggagcagtatgaccaggcaaaattgtcacgtatt
cttgacgtggcacaagacttgaaggccttgtcaatgctgctaaatggtactccatttgcc
tttgttattgaccttgctgcacttgcctctcgacgggaatacctcaaacttgacaaatgg
ctcacagataaaattcgggagcatggggagcctttcatccaggcctgtatgactttctta
aagagaagatgtccatctatcctgggtggccttgctccagaaaaagatcagcccaaaagt
gctcagcttcctccagaaaccttggcgactatgttggcatgtctgcaagcttgtgctggg
agtgtttctcaggagctgtcagagacgatcctcaccatggtagctaactgcagcaatgtc
atgaataaggctagacagccaccacctggagtcatgccgaaaggacgcccgcccagtgct
agcagtttggatgccatctctcctgtacagatcgactcgcttgcaggaatggcatctctt
agtttaggtggctcagctgctcctcatacccagagcatgcaaggcttccctccaaacttg
ggctctgcattcagtactcctcagtcaccagcaaaagcattcccccctctttccactcaa
aaccagacaacaggtttcagtggcatcggaggactctcttcacagcttccagtaggtggt
cttactacgggtagcctgactggcataggaactggagccctgggccttcctgcagtgaac
aatgacccattcgtgcaaaggaagctgagcacatctggactgaaccagcctacattccag
cagagtaagatgaaaccttctgacttatctcaggtgtggccagaggctaatcagcacttt
agcaaagaaatagatgatgaggcaaacagctacttccagcgtatttacaaccatccacca
catccgaccatgtctgtagatgaggtcttagaaatgctgcagaggtttaaggactccaac
attaaacgggaacgagaagtgtttaactgtatgctgaggaacttgtttgaggaataccgt
ttctttccccagtacccagataaagagctgcacataacagcctgcctctttggtgggata
atagagaaaggactggttacttatatggcattgggcctggccctgcgctatgttcttgaa
gccttacgaaagccttttgcatccaaaatgtactattttggtattgctgcactagataga
tttaaaaatagattgaaggactatccccagtattgtcagcacttggcttctattagtcac
tttatacagttcccacatcatttacaggagtacatagaatatggacagcaatccagagat
cctcctgtgaagatgcagggttcaatcaccacccctggaagtattgcacttgcccaggct
caggcccaggcccaagttccagcaaaagctcctcttgctggccaagtcagcactatagta
accacctcaaccaccaccactgttgcaaaaaccattacaatcacccgaccaacgggagtc
agcttcaagaaagacgtgccgccttccattaatactaccaatattgatacgctgttagta
gcaacagatcaaactgagagaattgtggaacctccagagaatgtccaggaaaaaattgct
ttcatcttcaataatctgtctcagtcaaatatgacacagaaggttgaagaattgaaggaa
acagtgaaagaagagttcatgccttgggtatcacagtatcttgtgatgaagagagtcagt
attgagcctaattttcacagcttatattcaaacttccttgacacacttaagaatccagag
tttaataaaatggttctaaatgaaacctacagaaatatcaaggtgctactgacatcagat
aaagctgcagccaacttctcagaccgttccttgttgaagaaccttggtcactggctagga
atgattacactggctaaaaataagcccatcttgcacacggatttggatgtgaaatcnnnn
nnnnnnnnnnnnnnnnnggaattgctttatgtagtgccatttgttgccaaagtcttagaa
tccagtgtcaggagtgtggtcttcaggcctccaaacccatggacaatggccattatgaat
gttttagctgagctacatcaagaacatgatctaaaattgaatctgaagtttgagattgag
gtgctctgcaagaatcttgcactagacatcaatgagctgaaacctggaagtctcctgaaa
gataaggatcgtctgaaaaatctggatgagcagctgtctgctccaaagaaggatgtgaag
cagccagaagagctaccacccatcacaactactactgcttctacaactccagctaccagc
accacttgtacagccacggttcctccacagcctcagtacagttatcatgacatcaatgtc
tattctttaggagggttggctccacatattaccttaaatccgacgattccactgtttcaa
gcccacccgcagttgaagcagtgtgtgcggcaggcaatagaacgagcagtgcaagagctt
gtccatccagtggtcgatcggtccattaagattgccatgactacctgtgagcagatagtg
aggaaggactttgcactggattcagaggagtcacgaatgcgtgtggctgcacaccatatg
atgcgtaacctgactgctgggatggccatgattacctgcagggagcctttgctgatgagc
atagctaccaacttgaaaaatagttttgctactgcactgagggcagcctccccacaacag
agggacatgatggagcaggcagcagcccagttagctcaggataactgtgagctagcatgc
tgctttatccagaagacagctgtggaaaaggcaggccctgagatggacaagaggcttgca
actgaatttgagctcagaaaacatgctagacaagagggtcgtcggtactgtgatcctgtt
gtgttaacttaccaggctgagcggatgccagaacagatcaggttaaaggttggaggtgtg
gacccaaaacaactggctgtttatgaagagtttgcacgcaatgtccctggcttcttgcct
accaatgacttaactcagcctacaggattcttggctcagcccatgaagcaagcttgggct
acagatgatgtagcgcaaatctatgataaatgtatgacagaactggagcagcacctgcag
tccattccacacaccctcgccatgaatcctcaagctcaagcattgcgcagcctcttggag
gcagtggtggtggctcgtaactcccgtgatgctattgctgcacttggactgctgcagaag
gctgtagaaggcttactggatgccactagtggggcagatgctgacctcctgcttcgttat
cgtgagtgtcatctgcttgtgctgaaggctctgcaggacggccgtgcatatggatctcca
tggtgtaataaacaaattactaggtgcctgattgaatgcagagatgagtacaagtacaat
gtggaagctgtggagctgctaatccgcaatcaccttgttaacatgcagcagtatgacctt
cacttggctcagtcaatggagaatggcttgaactacatggctgtggcatttgccatgcag
ttggtaaagatcctgttggtggatgaaagaagtgtcgcccatgtaacagaggcagatctg
tttcacacaattgagacgctcatgaggattaatgctcattccagaggaaatgccccagaa
ggattacctcagctgatggaagtggtccgatcaaactatgaagcaatgattgaccgtgct
cacggaggtcccaatttcatgatgcattcaggaatttcccaggcctctgagtatgatgat
ccaccaggtctgagggagaaggcagagtacctgctaagggagtgggtgaacctctaccat
tcagctgcagcaggccgtgacagtaccaaagcattctctgcgtttgttggacagatgcac
cagcaaggaatcctgaaaacagatgacctgatcacccgctttttccgtctttgcaccgaa
atgtgtgttgaaatcagctatcgtgctcaggctgagcaacagcataaccctgctgccaac
cccaccatgattcgagccaagtgctaccacaatctggatgcctttgtgcgacttattgcg
ctgctagtgaagcactctggggaggcaaccaacacagttacaaagatcaacctcctgaat
aaggttcttggtattgtggtgggagttcttctgcaagaccatgatgttcggcagagtgag
tttcagcaacttccttaccatcgcattttcatcatgttgctgttggaattaaatgctcct
gagcatgtgctggagaccatcaacttccagacactcacagctttctgtaacacatttcac
atcctgaggcctacaaaagctccaggttttgtttatgcctggctggaactgatctcccat
cggatttttattgcaagaatgctggcacatacaccacagcagaagggttggcctatgtat
gcccagttattgatagatcttttcaagtacttggctcctttccttagaaatgtggaactc
accaaacctatgcaaattctttacaagggcactctgcgtgtgttgctggtcttgttgcac
gatttcccagaatttctttgtgactaccactatgggttctgtgatgtgatcccacctaac
tgtattcagctaaggaatctgatcctgagtgccttcccacggaacatgaggcttccagac
cctttcacccccaatctaaaggtggacatgttaagtgagattaatattgccccacgaata
ctcacaaatttcactggagtgatgccacctcagttcaagaaagacttggattcctatctc
aaaacccgttctccggtcacttttttgtctgacttgcgcagcaacctacaggtatcaaat
gaacctggcaaccgctacaacatccagctgattaatgcactggtgctctacgtaggtact
caagctattgcgcacattcacaacaaaggcagcacaccctctatgagcaccattacccac
tcagctcacatggacatcttccagaatttggcagtagacctggacactgaaggccgctac
cttttcttgaacgcaattgccaaccagctgcgctatcccaacagtcatacccactacttc
agttgtaccatgctgtacctgtttgcagaggccaacactgaggctatccaggagcagatc
actagggttctcttggaacggctgattgtaaataggcctcatccttggggtctccttatt
actttcattgagctgatcaaaaatccagcgtttaagttctggaaccatgagtttgttcac
tgtgctccagaaatcgaaaagttgttccagtcagttgcacagtgctgcatggggcagaag
caggcccagcaagtaatggaagggactggtgccagttag
DBGET
integrated database retrieval system
