Halorarum halophilum: HUG10_15300
Help
Entry
HUG10_15300 CDS
T06682
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
halg
Halorarum halophilum
Pathway
halg00040
Pentose and glucuronate interconversions
halg01100
Metabolic pathways
halg02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
halg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
HUG10_15300
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HUG10_15300
Enzymes [BR:
halg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
HUG10_15300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_2
Motif
Other DBs
NCBI-ProteinID:
QLG28823
UniProt:
A0A7D5L2X5
LinkDB
All DBs
Position
complement(3042987..3044519)
Genome browser
AA seq
510 aa
AA seq
DB search
MSTTLAGELVESVRRHADTVFEHGRDRYGDDRTPLLADAVDAGTLDAVPYDARDVDDGRR
LSNFAVQQEFLRTLVGLARSTGATEYRDEAAALTSWVLEELSDSAGLLYWGGHAAYDLDA
DELVINKDAHELKFEYPFYEFLWEVDAERTRRFVEAFWSAHVVDWGRLDFNRHGEWDGAV
GNPWDDEYEGGDVFFWGEGLTFVNTGSDLYYAAGLLSSFANEAAPLTWAERLARRYVETR
QEPGLSGYQFSQHPSYCNGPAIRGDRAQYQFAPYIHGDHLVYEGTLFRPRPIVQRQQLAL
GDRLGPRGESFTRWALEELRAWYEVAYRSDANEFEPMLTDGHSLEGFVCRRNGYFGPKGR
VVGPIDAGPEFFWTYARASRLTDDPVCWRAARDIGRGLGLGEVGRPDSKPDLSASDRTDP
PDYALLYGLLELHRATDRGEYLEAAQTLGTDLLEGRFRESTGAFVDDRNRARLDDPVPLS
LLHLAAAIREESAADLPTPVGAPRTPEGGI
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgacgctggccggcgaactcgtcgagtccgtccgacggcacgccgataccgtc
ttcgaacacggccgcgaccgatacggcgacgaccgaacgccgctcctggccgacgccgtc
gacgccgggacgcttgacgccgttccctacgacgcccgcgacgtggacgacggccgtcgg
ctctcgaacttcgccgtccagcaggagttcctccggacgctcgtcgggctcgcccggtcg
accggggcgaccgagtaccgcgacgaggcggcggcgctcacctcgtgggtcctcgaggaa
ctgtccgactcggcgggcctcctctactggggcggccacgccgcgtacgacctcgacgcc
gacgaactcgtgatcaacaaggacgcgcacgaactgaagttcgagtacccgttctacgag
ttcctctgggaggtcgacgccgaacggacccggcggttcgtcgaggcgttctggagcgcg
cacgtcgtcgactgggggcggctggacttcaaccgtcacggggagtgggacggggccgtc
gggaacccctgggacgacgagtacgaggggggcgacgtgttcttctggggcgaggggctc
acgttcgtcaacaccgggagcgacctctactacgccgccggactcctctcgtcgttcgcg
aacgaggcggccccgctgacgtgggccgagcggctcgcccgtcggtacgtcgagacgcgt
caggagcccgggctcagcggctaccaattcagccagcaccccagctactgcaacgggccg
gcgatccgaggcgaccgggcgcagtaccagttcgccccgtacatccacggcgaccacctc
gtctacgagggaacgctgttccgcccccgtccgatcgtccagcggcagcagctcgcgctc
ggcgaccggctcggtccgcggggggagtcgttcacgcggtgggcattggaagagctccgg
gcctggtacgaggtcgcctaccgctcggacgcgaacgagttcgagccgatgctcaccgac
gggcacagcctggaggggttcgtctgccggcgcaacgggtacttcgggccgaaggggcgc
gtcgtcggccccatcgacgccggcccggagttcttctggacgtacgcgcgggcgagtcgg
ctgacggacgacccggtctgttggcgggccgcccgggacattggccgggggctcggcctg
ggcgaagtcggccgccccgattcgaaaccggacctcagcgcgtccgaccgcaccgacccc
cccgactacgcgctcctgtacggactgctcgaactccaccgcgcgacggaccggggggag
tacctggaggcggcccagacgctcgggaccgacctcctggagggccggtttcgggagtcc
acgggggccttcgtggacgaccgaaatcgggctcggctggacgaccccgtcccgctctcc
ctgctccacctcgctgcagcaatccgggaagagagtgccgcagacctcccgacgccggtc
ggcgctccccggacgcccgagggtggaatctga
DBGET
integrated database retrieval system