Halomicrobium sp. LC1Hm: LC1Hm_1173
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Entry
LC1Hm_1173 CDS
T06261
Symbol
afuC
Name
(GenBank) Alpha-L-fucosidase
KO
K01206
alpha-L-fucosidase [EC:
3.2.1.51
]
Organism
hall
Halomicrobium sp. LC1Hm
Pathway
hall00511
Other glycan degradation
hall04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
hall00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
LC1Hm_1173 (afuC)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
LC1Hm_1173 (afuC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hall04147
]
LC1Hm_1173 (afuC)
Enzymes [BR:
hall01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.51 alpha-L-fucosidase
LC1Hm_1173 (afuC)
Exosome [BR:
hall04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
LC1Hm_1173 (afuC)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha_L_fucos
Fucosidase_C
Motif
Other DBs
NCBI-ProteinID:
QGA82230
LinkDB
All DBs
Position
1078850..1080229
Genome browser
AA seq
459 aa
AA seq
DB search
MVAYEPTWESLEQHELPDWFDDAKLGIFIHWGAYSVPAWAPVTDDGEVSESGYAEWYVRG
MYDEDSDVYDYHRSTYGEQVEYTDFLEQWSADGWDPERWATFFDEEVGARYVVLTAEHHD
GIQLWDSDVTDWTTVERGPNRDIVGELGAAVRDRDMKFAGSFHGLLNFFDPDNPGLFGHP
DVDDEGHPGPEYVEFMNEKLTELIDETRPDLLWLDGNWKADTEAYGTKETVAYYYEQAAE
EWDKEVAVNDRLGAGEEQTHGDFYTPEYETFDERQEHKWEATRGLGGSFGYNRNEPEHHY
LSVEELVHSFVDIVSKNGNLLINVGPRADGTIPAVQKERLRGLGEWLAVNGDAIYGTTYW
ERAADTVASSTDVRYTWKDGTLYATLFDWAIGEQTLFEDGPDVTPASVSLLTASGREPVD
WQHADGTVTIDFDANPPSDHPGVAYTLTLQDVANSASSS
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggtggcctacgagccgacgtgggagtcactcgaacagcacgagctaccggactggttc
gacgacgcgaagctcgggatcttcatccactggggggcctactccgtccccgcgtgggcc
cccgtcaccgacgacggggaagtcagcgagtccggttacgccgagtggtacgtcaggggg
atgtacgacgaagacagcgacgtgtacgactaccaccgctcgacctacggcgaacaggtc
gagtacaccgactttctggagcagtggagcgccgacggctgggatccggagcgctgggcg
accttcttcgacgaggaagtgggtgcgcgctacgtcgtcctgaccgcggaacaccacgac
ggcatccagctctgggacagcgacgtgaccgactggacgaccgtcgagcgcggtccgaac
cgggacatcgtcggcgaactcggtgcggccgtccgcgaccgcgacatgaagttcgccggc
tcctttcacggcctcctgaacttcttcgatccggacaaccccggtctgttcggtcacccg
gacgtcgacgacgagggccaccccggcccggagtacgtcgagttcatgaacgagaagctg
accgaactcatcgacgagacgcggccggatctcctgtggctcgacggcaactggaaggcc
gacaccgaggcgtacgggaccaaagagaccgtcgcctactactacgagcaggcggccgag
gagtgggacaaggaagtcgccgtcaacgaccgcctcggcgcgggcgaagagcagacacac
ggtgacttctacacccccgagtacgagacgttcgacgagagacaggaacacaagtgggaa
gcgacgcgcggactcggagggtcgttcgggtacaaccgcaacgaaccagagcaccactat
ctttcggtcgaggaactcgtccactcgttcgtcgacatcgtctcgaagaacggcaacctc
ctcatcaacgtcggcccgcgagcggacgggaccatcccggcggtccagaaagagcgcctg
cgaggactgggcgagtggctcgcggtcaacggcgatgccatctacggcaccacctactgg
gagcgagcggcggacaccgtcgcctccagcaccgacgtgcgctacacctggaaagacggg
acgctctacgcgacgctgttcgactgggccatcggcgaacagacgctcttcgaggacggt
cccgacgtgacgcccgcgtcggtgtcgctcctgacggcgtccggtcgcgagcccgtcgac
tggcagcacgcggacgggaccgtcaccatcgatttcgacgccaatccgccctctgaccat
ccgggcgtggcgtacacgctcacgctgcaggacgtggcgaactcggcatcgtcgtcctga
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