KEGG   Halomicrobium sp. LC1Hm: LC1Hm_1399
Entry
LC1Hm_1399        CDS       T06261                                 
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase
  KO
K01247  DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
Organism
hall  Halomicrobium sp. LC1Hm
Pathway
hall03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:hall00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    LC1Hm_1399 (alkA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hall03400]
    LC1Hm_1399 (alkA)
Enzymes [BR:hall01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.21  DNA-3-methyladenine glycosylase II
     LC1Hm_1399 (alkA)
DNA repair and recombination proteins [BR:hall03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     LC1Hm_1399 (alkA)
SSDB
Motif
Pfam: HhH-GPD HHH
Other DBs
NCBI-ProteinID: QGA82449
UniProt: A0A5Q0UNM9
LinkDB
Position
1299343..1299951
AA seq 202 aa
MSDPHDRLREDPDLGPLVETHGELTISPAEDFFARILTSIVRQQVSMASAAATRERLFDA
VAVTPSGVLAADDETLRDAGLSRQKTRYVNNVARAFEERGLSRTYFEDVDDEAVVDELTS
ITGVGEWTANMQLIFSLGREDVFPVGDLGVRKGMASLVDPELTRAEMSAYAERWAPYRSY
ASLYLWRVEEDIEESVDEVESL
NT seq 609 nt   +upstreamnt  +downstreamnt
gtgagcgacccccacgaccgactccgcgaggaccccgacctgggaccgctcgtcgagact
cacggcgagctgacgatctcgccggccgaggacttcttcgcgcgaatcctgacctcgatc
gtccgccaacaggtgtcgatggcgtcggcggctgccacccgcgagcgactgttcgacgcc
gtcgcggtaacgccgtcgggcgttctggcggccgacgacgagacactgcgtgacgccggc
ctctctcgacagaagacgcgttacgtcaacaacgtcgcgagagccttcgaggaacgcgga
ctctcacggacgtacttcgaggacgtggacgacgaagcggtcgtcgacgaactcacgtct
atcaccggcgtcggcgagtggacggcgaacatgcaactcatcttctcgctgggccgcgag
gacgtgttccccgtcggcgacctcggcgtccggaagggcatggcgtcgctcgtcgatccg
gagctgacccgcgccgagatgtccgcgtacgccgagcggtgggctccctatcggagctac
gccagtctctacctctggcgcgtcgaagaggacatcgaagagagtgtcgacgaggtcgaa
tcgctgtga

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