Halolamina sp. CBA1230: B4589_010505
Help
Entry
B4589_010505 CDS
T06651
Name
(GenBank) peptide chain release factor aRF-1
KO
K03265
peptide chain release factor subunit 1
Organism
haln
Halolamina sp. CBA1230
Pathway
haln03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
haln00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
B4589_010505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haln03019
]
B4589_010505
03012 Translation factors [BR:
haln03012
]
B4589_010505
Messenger RNA biogenesis [BR:
haln03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
B4589_010505
Translation factors [BR:
haln03012
]
Eukaryotic type
Release factors
B4589_010505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
DUF7562
YhfH
Motif
Other DBs
NCBI-ProteinID:
QKY20787
LinkDB
All DBs
Position
1995569..1996819
Genome browser
AA seq
416 aa
AA seq
DB search
MSTDAEEASEDRRKYEFRKVLEELQEYEGSGTQLVSIYIPEDRQISDVVAHVTQEHSEAA
NIKSKQTRTNVQDALTSIKDRLRYYDTYPPENGMVIFSGAIDAGGGQTEMITRTLESPPE
PIESFRYHCDSNFLVEPLEHMLADSGLFGLIVLDRREANVGWLKGKRVEPVKSATSLVPG
KQRKGGQSAQRFARLRLEAIDNFYQEVAGMADDLMVPKRHELDGILVGGPSPTKDEFLDG
DYLHHELQDKVLGKFDIAYTDESGLYDLVDAGQEALADQELVEDKNQMEEFFENLHTGGE
ATYGLGPTRKNLVMGSVDRLLLSEDLTEDVVVFECPNGHTEYETVERRHNTPEHECSECG
EQAEVEEREDVVDHLMEIADQRGTETKFISTDFEKGEQLLNAFGGIAGILRYETGV
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgagtaccgacgccgaagaggcaagcgaggacaggcggaagtacgagttccgcaaggtc
ctcgaggagctgcaggagtacgagggatcaggaacgcagctcgtctccatctacatcccc
gaggaccgccagatctccgacgtcgtcgcccacgtcacccaggagcactccgaggcggcc
aacatcaagtccaagcagacccggacgaacgtccaggacgcgctcacgtcgatcaaggac
cgcctgcgctactacgacacctacccgcccgagaacgggatggtgatcttctccggcgcc
atcgacgccggcggcggccagacggagatgatcacccgcaccctggagtcgccgccggaa
cccatcgagtcgttccgctaccactgcgactcgaacttcctggtcgagcccctggagcat
atgctggccgactcggggctgttcggcctgatcgtgctcgaccgccgcgaggccaacgtc
ggctggctcaaggggaaacgcgtcgagccggtgaagtccgccacctcactggtgccgggc
aagcagcgcaaaggtggccagtcagcgcagcgattcgcccgactgcgcctcgaagcgatc
gacaacttctaccaggaggtcgcggggatggccgacgacctgatggtccctaagcgccac
gagctcgacgggatcctcgtcggcggcccgtcgccgaccaaagacgagttcctcgacggc
gactacctccaccacgagctgcaggacaaggtgctcgggaagttcgacatcgcctacacc
gacgagtcggggctgtacgacctcgtcgacgccgggcaggaggcgctggccgaccaggag
ctggtcgaggacaagaaccagatggaggagttcttcgagaacctccacaccggcggcgag
gcgacctacgggctggggccgacccggaagaacctcgtgatgggctcggtcgaccgcctg
ctgctctcggaggacctgaccgaggacgtggtcgtcttcgagtgtccgaacgggcacacc
gagtacgagaccgtcgagcgccggcacaacacgcccgagcacgagtgttcggagtgtggc
gagcaggccgaggtcgaggagcgcgaggacgtggtcgaccacctgatggagatcgccgac
cagcgcgggacggagacgaagttcatcagcaccgacttcgagaagggcgagcagctgctg
aacgcgttcggcgggatcgccgggattctgcggtacgagacgggtgtgtaa
DBGET
integrated database retrieval system
