Halorubrum sp. CBA1229: Hrr1229_003855
Help
Entry
Hrr1229_003855 CDS
T06658
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
halq
Halorubrum sp. CBA1229
Pathway
halq02024
Quorum sensing
halq03060
Protein export
halq03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
halq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
Hrr1229_003855 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Hrr1229_003855 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Hrr1229_003855 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
halq02044
]
Hrr1229_003855 (ffh)
Enzymes [BR:
halq01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
Hrr1229_003855 (ffh)
Secretion system [BR:
halq02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
Hrr1229_003855 (ffh)
Eukaryotic Sec-SRP protein
Hrr1229_003855 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
nSTAND3
ArsA_ATPase
CbiA
DUF2336
AAA_24
cobW
Zeta_toxin
AAA_22
APS_kinase
SMC_N
AAA_33
Pterin_4a
KTI12
ResIII
Motif
Other DBs
NCBI-ProteinID:
QKY16057
LinkDB
All DBs
Position
complement(773921..775315)
Genome browser
AA seq
464 aa
AA seq
DB search
MVLDDLGSSLRGSLDKLQGKSRLSESDVEEIVKEIQRSLLSADVDVSLVMELSDSIKSRA
LEEEPPGGTTAKDHVLKIVYEEMVELVGDSTELPLENQTILLAGLQGSGKTTSAAKMAWW
FSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVDFYGNPDNDDPVDIARTGLAETEDADV
HIVDTAGRHALEDDLIAEIEEIERAVDPDRSLLVLDAAIGQGAKEQARQFEESIGIEGVM
ITKLDGTAKGGGALTAVNETDSSIAFLGTGETVQDIERFEPSGFISRLLGMGDLKQLSER
VERAMQEAQDEDEDWDPQDMLQGEFTLKDMKKQMDAMNRMGPLDQVMDMIPGMGGGMMDQ
LPDDAMDVTQDRMRKFERIMDSMTDEELTNPRVVGQSRTERIARGSGTDEETVQQLLEQH
SMMEQTISQFQGMGEGDMQRMMKKMGGDGGGGLGDMMGGGKGPF
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggtactcgacgacctcggttcgtccctgcggggcagcctcgacaagctccaggggaag
tcccggctctccgagagcgacgtcgaggagatcgtcaaggagatccagcgctcgctcctc
tcggccgacgtcgacgtctccctcgtcatggagctgtcggactcgatcaagtcccgggcc
ctcgaagaggagccgccgggcggcaccacggcgaaagaccacgtcctcaagatcgtctac
gaggagatggtcgagctggtcggggactcgacggagctccccctcgaaaaccagacgatc
ctcctcgccggcctccaagggtcggggaagaccacctccgccgcgaagatggcgtggtgg
ttctcgaagaagggactccgccccgcggtcatccagacggacaccttccgtcccggcgcg
tacgaccaggccaagcagatgtgcgagcgcgcggaggtcgacttctacgggaaccccgac
aacgacgaccccgtcgacatcgctcggacgggcttagcggagaccgaagacgccgacgtc
cacatcgtggacacggccgggcgccacgcgctcgaagacgacctcatcgcggagatcgag
gagatcgagcgcgcggtcgaccccgaccgctccctcctcgtgctcgacgccgcgatcggg
cagggcgcgaaggagcaggcccgccagttcgaggagtcgatcggcatcgagggcgtgatg
atcaccaagctcgacgggaccgcgaaaggtggcggcgcgctcacggcggtcaacgagacc
gactcctccatcgccttcctcgggaccggcgagaccgtccaggacatcgagcggttcgag
ccctccgggttcatctcgcggctgctcgggatgggcgacctcaaacagctctccgagcgc
gtcgagcgcgccatgcaggaggcccaggacgaggacgaggactgggacccccaggacatg
ctgcagggggagttcaccctgaaggacatgaaaaagcagatggacgcgatgaaccggatg
ggccccctcgaccaggtgatggacatgatccccggcatgggcggcgggatgatggaccag
ctcccggacgacgcgatggacgtgacgcaggaccggatgcgcaagttcgagcgcatcatg
gactcgatgacagatgaggagctgacgaacccccgcgtcgtcggccagtcgcgcaccgag
cggatcgcccgcggctccggcaccgacgaggagacggtccagcagctcttagagcagcac
tccatgatggaacagacgatcagccagttccaggggatgggcgagggcgacatgcagcgc
atgatgaagaagatgggcggcgacggcggcggcggcctcggcgacatgatgggcggcggc
aagggcccgttctga
DBGET
integrated database retrieval system
