Halorubrum sp. CBA1229: Hrr1229_006410
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Entry
Hrr1229_006410 CDS
T06658
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
halq
Halorubrum sp. CBA1229
Pathway
halq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
halq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Hrr1229_006410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halq03021
]
Hrr1229_006410
Enzymes [BR:
halq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Hrr1229_006410
Transcription machinery [BR:
halq03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
Hrr1229_006410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
HTH_3
MnmE_helical
HTH_24
Motif
Other DBs
NCBI-ProteinID:
QKY18387
LinkDB
All DBs
Position
1280810..1283731
Genome browser
AA seq
973 aa
AA seq
DB search
MQTPKVLGGIDFGLMDPETYRDMSATKVITADTYDDDGYPIDMGLMDPRLGVIDPGLECR
TCGAHSGSCNGHFGHIELAAPVIHVGFTKLIRRLLRSTCRECGRLALDEAQRDEFRDRYE
RAKELGDDEHDVLKAAVRQARKASTCPFCGEPQADIKHEKPTTYYEVQDVLSGDYSERIA
AAMQPDEEEDDPGTSPQELAEKTDIALDRINEIMAGEFRPRKEDRRAIEKALDVDLTEED
MNKLMPSDIRDWFEDIPDEDLEVLGIDAEDSRPEWMILTVLPVPPVTTRPSITLDNGQRS
EDDLTHKLVDIIRINQRFMENREAGAPQLIIEDLWELLQYHVTTFVDNEISGTPPARHRS
GRPLKTLSQRLKGKEGRFRGSLSGKRVNFSARTVISPDPTLSLNEVGVPDRVAKEMTQTL
NVTERNVEEARQYVRNGPEAHPGANYVRRPDGRRLKVTEKNCEELAEKVEADWEVNRHLV
DGDIVIFNRQPSLHRMSIMAHEVVVMPYKTFRLNTVVCPPYNADFDGDEMNMHALQNEEA
RAEARVLMRVQEQILSPRFGGNIIGAIQDHISGTYLLTHSNPEFTETQALDLLRATRVDE
LPEADGVDDDGRDYWTGRTLFSELLPDDLTLHFSSSTGDDVVIENGQLIEGTIDEDAVGA
FGGEVVDTLTKEYGETRSRVFINEIASLAMRAIMHFGFSIGIDDESIPPEAEEQVDDAIE
SAYDRVQELISTYEAGELESLPGRGVDETLEMKIMQTLGKARDSAGEIADQHFGDDNPAV
VMARSGARGSMLNLTQMAGSVGQQAVRGERINRGYEDRTLSHYKENDLSAEAHGFVENSY
RGGLTPEEFFFHAMGGREGLVDTAVRTSKSGYLQRRLINALSELEAQYDGTVRDTSGRIV
QFEFGEDGTSPVKVSSGEGDGIDVDDIVDRVVDSEFESDDEKERFLGERSPPTNLSEHAG
PGLNKASGVESDD
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacaccgaaagtgctcggcggcatcgacttcggcctcatggacccggagacgtac
cgggacatgtcggcgacgaaggtgatcacggccgacacgtacgacgacgacggctacccg
atcgacatggggctgatggacccgcggctcggcgtcatcgaccccggcctggagtgtcgg
acctgcggcgcccactccggctcctgtaacggccacttcggccacatcgagctggccgcg
cccgtcatccacgtgggcttcacgaagctcatccggcggctgctccgctcgacgtgccgc
gagtgcggccggctcgccttagacgaggcgcagcgcgacgagttccgcgaccgctacgag
cgagcgaaggagctcggcgacgacgagcacgacgtgctgaaggccgccgtccggcaggcc
cggaaggcgtcgacctgcccgttctgcggcgagccgcaggcggacatcaaacacgagaag
ccgaccacgtactacgaggtccaggacgtgctctcgggcgactactccgagcgcatcgcg
gccgcgatgcagcccgacgaggaggaggacgacccgggcacctcgccgcaggagctcgcc
gagaagaccgacatcgccctcgaccggatcaacgagatcatggccggcgagttccgcccg
cgcaaggaggaccggcgcgctatcgagaaggcgctcgacgtcgacctcacggaggaggac
atgaacaagctgatgccctcggacatccgcgactggttcgaggacatcccggacgaggac
ctcgaggtcctcggtatcgacgcggaggactcccggccggagtggatgatcctgacggtc
ctccccgtcccgccggtgaccacgcgcccctccatcacgctcgacaacggccagcgctcc
gaggacgacctcacgcacaagctggtcgacatcatccggatcaaccagcggttcatggag
aaccgcgaggcgggcgccccgcagctgatcatcgaggacctctgggagctgctccagtac
cacgtcaccacgttcgtcgacaacgagatcagcgggacgccgccggcgcggcaccgctcc
ggtcgtcccctcaagaccctcagccagcggctgaaggggaaggaaggccgcttccgcggc
tcgctgtcggggaagcgcgtcaacttctccgcccggaccgtcatctcgccggacccgacc
ctctcgctgaacgaggtcggcgtgccggaccgcgtcgccaaggagatgacccagacactc
aacgtcaccgagcgcaacgtcgaggaggcgcggcagtacgtccggaacggcccggaggcc
caccccggcgcgaactacgtgcgtcgtcccgacggacgtcgtctgaaggtgaccgagaag
aactgcgaggagctcgccgagaaggtcgaggccgactgggaggtcaaccgccacctcgtc
gacggcgacatcgtgatcttcaaccggcagccctcgctgcaccggatgtccatcatggcc
cacgaggtcgtggtgatgccgtacaagacgttccggctcaacaccgtcgtctgcccgccg
tacaacgccgacttcgacggcgacgagatgaacatgcacgcgctccagaacgaggaggcc
cgcgccgaggcgcgcgtcctcatgcgcgtgcaagagcagatcctctcgccgcggttcggc
gggaacatcatcggcgcgatccaggaccacatctccgggacgtacctgctcacgcactcg
aaccccgagttcaccgagacgcaggcgctcgacctgctccgggcgacgcgggtggacgag
ctgcccgaggccgacggcgtcgacgacgacggccgcgactactggaccggccggacgctg
ttctccgagctgctgcccgacgacctcacgctgcacttctcgtcgtcgaccggcgacgac
gtcgtcatcgagaacggccagctgatcgaggggacgatcgacgaggacgccgtcggggcg
ttcggcggcgaggtcgtcgacaccctcaccaaggagtacggcgagacgcgctcgcgcgtg
ttcatcaacgagatcgcgtcgctggcgatgcgcgcgatcatgcacttcggcttctcgatc
gggatcgacgacgagtcgatcccgccggaggccgaagagcaggtcgacgacgcgatcgag
agcgcctacgaccgcgttcaggagctgatctcgacgtacgaggccggcgagttggagtcg
ctgccgggccgcggcgtcgacgagacgctcgagatgaagatcatgcagacgctcgggaag
gcccgcgactcggccggggagatcgccgaccagcacttcggcgacgacaacccggcggtc
gtgatggcccgctccggcgcgcgtggctcgatgctgaacctcacgcagatggccggctcc
gtcggccagcaggcggtccgcggcgagcggatcaaccgcggctacgaggaccggacactc
tctcactacaaggagaacgacctctccgcggaggcgcacggcttcgtggagaactcctac
cgcggcgggctcacgcccgaggagttcttcttccacgcgatgggcggccgcgaggggctg
gtcgacacggcggtccggacctccaagtccggctacctgcagcgccgtctcatcaacgcg
ctctccgagctcgaggcgcagtacgacggcacggtccgagacacctcgggtcggatcgtc
cagttcgagttcggcgaggacggcacctcgccggtgaaggtctcctcgggcgagggcgac
ggcatcgacgtcgacgacatcgtcgaccgcgtcgtcgactccgagttcgagtccgacgac
gagaaggagcggttcctcggcgagcgttcgccgccgacgaacctgtcggaacacgccgga
ccgggcctgaacaaggcctcgggggtggagtcggatgactga
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